Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 CENPM-204ENST00000402420 688 ntTSL 5 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 LBH-204ENST00000406087 559 ntTSL 4 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 ELK2BP-201ENST00000415014 1224 ntBASIC11.87□□□□□ -0.51
UPK3BQ9BT76 LINC00982-205ENST00000420957 435 ntBASIC11.87□□□□□ -0.51
UPK3BQ9BT76 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 UNC93B6-202ENST00000528242 690 ntBASIC11.87□□□□□ -0.51
UPK3BQ9BT76 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 AC034105.1-201ENST00000563488 319 ntBASIC11.87□□□□□ -0.51
UPK3BQ9BT76 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 AL671883.3-201ENST00000603274 991 ntBASIC11.87□□□□□ -0.51
UPK3BQ9BT76 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 AC092850.2-201ENST00000623821 2697 ntBASIC11.87□□□□□ -0.51
UPK3BQ9BT76 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 AC126755.1-201ENST00000525846 6405 ntBASIC11.87□□□□□ -0.51
UPK3BQ9BT76 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
UPK3BQ9BT76 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 AP002414.1-201ENST00000391405 1147 ntBASIC11.86□□□□□ -0.51
UPK3BQ9BT76 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 AC009947.1-201ENST00000444350 727 ntBASIC11.86□□□□□ -0.51
UPK3BQ9BT76 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 AC008667.4-201ENST00000607370 168 ntBASIC11.86□□□□□ -0.51
UPK3BQ9BT76 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
UPK3BQ9BT76 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
UPK3BQ9BT76 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms