Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.21■□□□□ 0.35
SEMA3CQ99985 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
SEMA3CQ99985 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC17.21■□□□□ 0.35
SEMA3CQ99985 RPL13AP23-201ENST00000480739 586 ntBASIC17.21■□□□□ 0.35
SEMA3CQ99985 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SEMA3CQ99985 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.21■□□□□ 0.35
SEMA3CQ99985 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.21■□□□□ 0.35
SEMA3CQ99985 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA3CQ99985 Z83851.2-201ENST00000609564 659 ntBASIC17.21■□□□□ 0.35
SEMA3CQ99985 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA3CQ99985 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA3CQ99985 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
SEMA3CQ99985 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA3CQ99985 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA3CQ99985 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
SEMA3CQ99985 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA3CQ99985 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SEMA3CQ99985 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.21■□□□□ 0.35
SEMA3CQ99985 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SEMA3CQ99985 AC104109.2-201ENST00000602919 1418 ntBASIC17.21■□□□□ 0.34
SEMA3CQ99985 KRT8P49-201ENST00000604166 1432 ntBASIC17.21■□□□□ 0.34
SEMA3CQ99985 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
SEMA3CQ99985 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.2■□□□□ 0.34
SEMA3CQ99985 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA3CQ99985 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.2■□□□□ 0.34
SEMA3CQ99985 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SEMA3CQ99985 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA3CQ99985 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA3CQ99985 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
SEMA3CQ99985 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.2■□□□□ 0.34
SEMA3CQ99985 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
SEMA3CQ99985 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.2■□□□□ 0.34
SEMA3CQ99985 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.2■□□□□ 0.34
SEMA3CQ99985 OR7E47P-204ENST00000575924 449 ntBASIC17.2■□□□□ 0.34
SEMA3CQ99985 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.2■□□□□ 0.34
SEMA3CQ99985 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
SEMA3CQ99985 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.2■□□□□ 0.34
SEMA3CQ99985 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SEMA3CQ99985 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.2■□□□□ 0.34
SEMA3CQ99985 REXO1L3P-201ENST00000622202 1288 ntBASIC17.2■□□□□ 0.34
SEMA3CQ99985 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA3CQ99985 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.2■□□□□ 0.34
SEMA3CQ99985 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA3CQ99985 AC106886.4-201ENST00000623557 2502 ntBASIC17.2■□□□□ 0.34
SEMA3CQ99985 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA3CQ99985 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.2■□□□□ 0.34
SEMA3CQ99985 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA3CQ99985 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA3CQ99985 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.2■□□□□ 0.34
SEMA3CQ99985 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SEMA3CQ99985 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA3CQ99985 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA3CQ99985 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA3CQ99985 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.2■□□□□ 0.34
SEMA3CQ99985 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA3CQ99985 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.19■□□□□ 0.34
SEMA3CQ99985 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA3CQ99985 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA3CQ99985 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
SEMA3CQ99985 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.19■□□□□ 0.34
SEMA3CQ99985 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA3CQ99985 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA3CQ99985 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SEMA3CQ99985 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA3CQ99985 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC17.19■□□□□ 0.34
SEMA3CQ99985 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
SEMA3CQ99985 METTL26-205ENST00000397666 726 ntTSL 2 BASIC17.19■□□□□ 0.34
SEMA3CQ99985 MIR1233-2-201ENST00000408138 82 ntBASIC17.19■□□□□ 0.34
SEMA3CQ99985 MIR1233-1-201ENST00000408722 82 ntBASIC17.19■□□□□ 0.34
SEMA3CQ99985 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
SEMA3CQ99985 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA3CQ99985 PRSS29P-201ENST00000440800 595 ntBASIC17.19■□□□□ 0.34
SEMA3CQ99985 SLC25A1P1-201ENST00000528351 927 ntBASIC17.19■□□□□ 0.34
SEMA3CQ99985 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA3CQ99985 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.19■□□□□ 0.34
SEMA3CQ99985 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.19■□□□□ 0.34
SEMA3CQ99985 AC145285.3-201ENST00000564603 959 ntBASIC17.19■□□□□ 0.34
SEMA3CQ99985 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.19■□□□□ 0.34
SEMA3CQ99985 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC17.19■□□□□ 0.34
SEMA3CQ99985 AC010654.1-201ENST00000615722 808 ntBASIC17.19■□□□□ 0.34
SEMA3CQ99985 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA3CQ99985 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA3CQ99985 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA3CQ99985 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA3CQ99985 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.19■□□□□ 0.34
SEMA3CQ99985 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA3CQ99985 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA3CQ99985 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
SEMA3CQ99985 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
SEMA3CQ99985 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.19■□□□□ 0.34
SEMA3CQ99985 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA3CQ99985 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.19■□□□□ 0.34
SEMA3CQ99985 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SEMA3CQ99985 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEMA3CQ99985 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
SEMA3CQ99985 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC17.18■□□□□ 0.34
SEMA3CQ99985 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.18■□□□□ 0.34
SEMA3CQ99985 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEMA3CQ99985 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEMA3CQ99985 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms