Protein–RNA interactions for Protein: Q96TA2

YME1L1, ATP-dependent zinc metalloprotease YME1L1, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YME1L1Q96TA2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
YME1L1Q96TA2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 MRPS18AP1-201ENST00000414458 589 ntBASIC18.11■□□□□ 0.49
YME1L1Q96TA2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 AC003101.2-201ENST00000612557 442 ntBASIC18.11■□□□□ 0.49
YME1L1Q96TA2 AC018529.1-201ENST00000613063 361 ntBASIC18.11■□□□□ 0.49
YME1L1Q96TA2 AL590560.3-201ENST00000623350 461 ntBASIC18.11■□□□□ 0.49
YME1L1Q96TA2 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
YME1L1Q96TA2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 RN7SL692P-201ENST00000464677 288 ntBASIC18.1■□□□□ 0.49
YME1L1Q96TA2 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 AL596325.1-201ENST00000563991 1082 ntBASIC18.1■□□□□ 0.49
YME1L1Q96TA2 AL138918.1-201ENST00000568306 659 ntBASIC18.1■□□□□ 0.49
YME1L1Q96TA2 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 SPDYE22P-201ENST00000582158 798 ntBASIC18.1■□□□□ 0.49
YME1L1Q96TA2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
YME1L1Q96TA2 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.09■□□□□ 0.49
YME1L1Q96TA2 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YME1L1Q96TA2 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YME1L1Q96TA2 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YME1L1Q96TA2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YME1L1Q96TA2 OR8S1-201ENST00000310194 1080 ntBASIC18.09■□□□□ 0.49
YME1L1Q96TA2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
YME1L1Q96TA2 NME9-203ENST00000383180 2133 ntTSL 2 BASIC18.09■□□□□ 0.49
YME1L1Q96TA2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.09■□□□□ 0.49
YME1L1Q96TA2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.09■□□□□ 0.49
YME1L1Q96TA2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.09■□□□□ 0.49
YME1L1Q96TA2 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.09■□□□□ 0.49
YME1L1Q96TA2 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.09■□□□□ 0.49
YME1L1Q96TA2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
YME1L1Q96TA2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.09■□□□□ 0.49
YME1L1Q96TA2 RARRES2P9-201ENST00000565168 469 ntBASIC18.09■□□□□ 0.49
YME1L1Q96TA2 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
YME1L1Q96TA2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
YME1L1Q96TA2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YME1L1Q96TA2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YME1L1Q96TA2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YME1L1Q96TA2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
YME1L1Q96TA2 ABALON-201ENST00000629058 1903 ntBASIC18.09■□□□□ 0.49
YME1L1Q96TA2 LTB4R2-202ENST00000528054 3092 ntBASIC18.09■□□□□ 0.49
YME1L1Q96TA2 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
YME1L1Q96TA2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
YME1L1Q96TA2 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
YME1L1Q96TA2 AC022144.1-201ENST00000602255 1580 ntBASIC18.08■□□□□ 0.49
YME1L1Q96TA2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms