Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 AL135744.1-201ENST00000565098 629 ntBASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 RARRES2P8-201ENST00000566335 367 ntBASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 RN7SL204P-201ENST00000582831 262 ntBASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 MIR4515-201ENST00000584082 81 ntBASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SLC46A1Q96NT5 AC016396.2-201ENST00000562575 1417 ntBASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 GPS2P2-201ENST00000430745 888 ntBASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 AL161645.1-201ENST00000622716 1255 ntBASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SLC46A1Q96NT5 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 PCDHB18P-201ENST00000524813 2368 ntBASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 AC107890.1-201ENST00000422478 521 ntBASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 RBPMS2P1-201ENST00000437762 623 ntBASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 DUX4L17-201ENST00000557360 1267 ntBASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SLC46A1Q96NT5 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms