Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 AC023274.1-201ENST00000418278 595 ntBASIC15.37■□□□□ 0.05
LRRC46Q96FV0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 AL139424.1-201ENST00000607572 797 ntBASIC15.37■□□□□ 0.05
LRRC46Q96FV0 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.37■□□□□ 0.05
LRRC46Q96FV0 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 AC108860.2-201ENST00000562760 2183 ntBASIC15.36■□□□□ 0.05
LRRC46Q96FV0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 MRPL20P1-201ENST00000400819 433 ntBASIC15.36■□□□□ 0.05
LRRC46Q96FV0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 MCCD1P2-201ENST00000423228 335 ntBASIC15.36■□□□□ 0.05
LRRC46Q96FV0 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 RPS15P9-201ENST00000494093 319 ntBASIC15.36■□□□□ 0.05
LRRC46Q96FV0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 SNHG9-202ENST00000564014 471 ntBASIC15.36■□□□□ 0.05
LRRC46Q96FV0 AC109462.3-201ENST00000573934 613 ntBASIC15.36■□□□□ 0.05
LRRC46Q96FV0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 AC004817.3-201ENST00000602957 2129 ntBASIC15.36■□□□□ 0.05
LRRC46Q96FV0 AC008667.4-201ENST00000607370 168 ntBASIC15.36■□□□□ 0.05
LRRC46Q96FV0 AC134684.3-201ENST00000641758 218 ntBASIC15.36■□□□□ 0.05
LRRC46Q96FV0 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRRC46Q96FV0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 PMS2P2-201ENST00000425039 1128 ntBASIC15.35■□□□□ 0.05
LRRC46Q96FV0 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 VN2R19P-201ENST00000442399 1052 ntBASIC15.35■□□□□ 0.05
LRRC46Q96FV0 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.35■□□□□ 0.05
LRRC46Q96FV0 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms