Protein–RNA interactions for Protein: Q96C10

DHX58, Probable ATP-dependent RNA helicase DHX58, humanhuman

Predictions only

Length 678 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX58Q96C10 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DHX58Q96C10 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DHX58Q96C10 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.18■□□□□ 0.66
DHX58Q96C10 AP002414.1-201ENST00000391405 1147 ntBASIC19.18■□□□□ 0.66
DHX58Q96C10 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
DHX58Q96C10 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.18■□□□□ 0.66
DHX58Q96C10 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DHX58Q96C10 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.18■□□□□ 0.66
DHX58Q96C10 AC091304.2-201ENST00000564639 760 ntBASIC19.18■□□□□ 0.66
DHX58Q96C10 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.18■□□□□ 0.66
DHX58Q96C10 AL355877.3-201ENST00000622820 899 ntBASIC19.18■□□□□ 0.66
DHX58Q96C10 AC012313.10-201ENST00000623509 926 ntBASIC19.18■□□□□ 0.66
DHX58Q96C10 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
DHX58Q96C10 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DHX58Q96C10 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
DHX58Q96C10 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DHX58Q96C10 TUBB8P12-201ENST00000308911 1335 ntBASIC19.18■□□□□ 0.66
DHX58Q96C10 TUBB7P-202ENST00000428444 1305 ntBASIC19.18■□□□□ 0.66
DHX58Q96C10 TUBB8P7-204ENST00000567960 1332 ntBASIC19.18■□□□□ 0.66
DHX58Q96C10 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DHX58Q96C10 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
DHX58Q96C10 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DHX58Q96C10 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
DHX58Q96C10 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
DHX58Q96C10 AC243591.1-201ENST00000452967 1364 ntBASIC19.18■□□□□ 0.66
DHX58Q96C10 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
DHX58Q96C10 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.17■□□□□ 0.66
DHX58Q96C10 NCF1C-201ENST00000438382 1427 ntBASIC19.17■□□□□ 0.66
DHX58Q96C10 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DHX58Q96C10 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DHX58Q96C10 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DHX58Q96C10 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.17■□□□□ 0.66
DHX58Q96C10 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC19.17■□□□□ 0.66
DHX58Q96C10 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
DHX58Q96C10 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DHX58Q96C10 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DHX58Q96C10 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.17■□□□□ 0.66
DHX58Q96C10 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.17■□□□□ 0.66
DHX58Q96C10 SART3-203ENST00000546611 1184 ntBASIC19.17■□□□□ 0.66
DHX58Q96C10 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.17■□□□□ 0.66
DHX58Q96C10 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC19.17■□□□□ 0.66
DHX58Q96C10 AC008608.2-201ENST00000606089 416 ntBASIC19.17■□□□□ 0.66
DHX58Q96C10 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DHX58Q96C10 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
DHX58Q96C10 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DHX58Q96C10 AL603756.1-201ENST00000606511 2163 ntBASIC19.17■□□□□ 0.66
DHX58Q96C10 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.17■□□□□ 0.66
DHX58Q96C10 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DHX58Q96C10 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
DHX58Q96C10 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
DHX58Q96C10 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
DHX58Q96C10 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DHX58Q96C10 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
DHX58Q96C10 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.17■□□□□ 0.66
DHX58Q96C10 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DHX58Q96C10 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DHX58Q96C10 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
DHX58Q96C10 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
DHX58Q96C10 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
DHX58Q96C10 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DHX58Q96C10 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DHX58Q96C10 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
DHX58Q96C10 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DHX58Q96C10 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.16■□□□□ 0.66
DHX58Q96C10 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DHX58Q96C10 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DHX58Q96C10 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DHX58Q96C10 FGFR3P6-201ENST00000457012 610 ntBASIC19.16■□□□□ 0.66
DHX58Q96C10 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
DHX58Q96C10 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.16■□□□□ 0.66
DHX58Q96C10 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DHX58Q96C10 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.16■□□□□ 0.66
DHX58Q96C10 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
DHX58Q96C10 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.16■□□□□ 0.66
DHX58Q96C10 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
DHX58Q96C10 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
DHX58Q96C10 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DHX58Q96C10 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.16■□□□□ 0.66
DHX58Q96C10 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DHX58Q96C10 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
DHX58Q96C10 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.16■□□□□ 0.66
DHX58Q96C10 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
DHX58Q96C10 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DHX58Q96C10 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
DHX58Q96C10 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DHX58Q96C10 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DHX58Q96C10 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DHX58Q96C10 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DHX58Q96C10 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DHX58Q96C10 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DHX58Q96C10 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC19.15■□□□□ 0.66
DHX58Q96C10 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DHX58Q96C10 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DHX58Q96C10 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DHX58Q96C10 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
DHX58Q96C10 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DHX58Q96C10 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
DHX58Q96C10 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
DHX58Q96C10 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC19.15■□□□□ 0.66
DHX58Q96C10 AKR1C7P-201ENST00000305623 895 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms