Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 TTTY23B-201ENST00000442790 549 ntBASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 AL512361.1-201ENST00000554200 418 ntBASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 AC044860.1-202ENST00000559481 777 ntBASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 MIR4492-201ENST00000581627 80 ntBASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM43Q96BQ3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRIM43Q96BQ3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
TRIM43Q96BQ3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 FAM86MP-201ENST00000340703 885 ntBASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 TMEM14DP-201ENST00000422205 345 ntBASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 EGFEM1P-202ENST00000431685 1563 ntBASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM43Q96BQ3 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 SLC25A6P5-201ENST00000435663 894 ntBASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM43Q96BQ3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM43Q96BQ3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.18■□□□□ 0.5
TRIM43Q96BQ3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM43Q96BQ3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRIM43Q96BQ3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM43Q96BQ3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.18■□□□□ 0.5
TRIM43Q96BQ3 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRIM43Q96BQ3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRIM43Q96BQ3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
TRIM43Q96BQ3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRIM43Q96BQ3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms