Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC19.97■□□□□ 0.79
BRF1Q92994 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.97■□□□□ 0.79
BRF1Q92994 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BRF1Q92994 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
BRF1Q92994 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.97■□□□□ 0.79
BRF1Q92994 FAAHP1-202ENST00000446499 1238 ntBASIC19.97■□□□□ 0.79
BRF1Q92994 RPS15P9-201ENST00000494093 319 ntBASIC19.97■□□□□ 0.79
BRF1Q92994 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.97■□□□□ 0.79
BRF1Q92994 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.97■□□□□ 0.79
BRF1Q92994 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC19.97■□□□□ 0.79
BRF1Q92994 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.97■□□□□ 0.79
BRF1Q92994 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC19.97■□□□□ 0.79
BRF1Q92994 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.97■□□□□ 0.79
BRF1Q92994 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BRF1Q92994 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.97■□□□□ 0.79
BRF1Q92994 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.97■□□□□ 0.79
BRF1Q92994 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
BRF1Q92994 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
BRF1Q92994 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BRF1Q92994 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
BRF1Q92994 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.97■□□□□ 0.79
BRF1Q92994 AL391256.1-201ENST00000443260 1855 ntBASIC19.96■□□□□ 0.79
BRF1Q92994 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.96■□□□□ 0.79
BRF1Q92994 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.96■□□□□ 0.79
BRF1Q92994 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BRF1Q92994 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BRF1Q92994 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRF1Q92994 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRF1Q92994 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
BRF1Q92994 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.96■□□□□ 0.79
BRF1Q92994 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRF1Q92994 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BRF1Q92994 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRF1Q92994 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRF1Q92994 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.96■□□□□ 0.79
BRF1Q92994 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.96■□□□□ 0.79
BRF1Q92994 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.96■□□□□ 0.79
BRF1Q92994 AC136632.2-201ENST00000512891 861 ntBASIC19.96■□□□□ 0.79
BRF1Q92994 AP002469.2-201ENST00000531724 424 ntBASIC19.96■□□□□ 0.79
BRF1Q92994 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.96■□□□□ 0.79
BRF1Q92994 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.96■□□□□ 0.79
BRF1Q92994 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
BRF1Q92994 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRF1Q92994 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRF1Q92994 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.96■□□□□ 0.79
BRF1Q92994 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRF1Q92994 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC19.96■□□□□ 0.79
BRF1Q92994 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRF1Q92994 TNRC18P3-201ENST00000441896 2691 ntBASIC19.96■□□□□ 0.79
BRF1Q92994 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRF1Q92994 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRF1Q92994 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRF1Q92994 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
BRF1Q92994 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BRF1Q92994 AC002310.6-201ENST00000624451 1377 ntBASIC19.95■□□□□ 0.79
BRF1Q92994 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
BRF1Q92994 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.95■□□□□ 0.78
BRF1Q92994 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC19.95■□□□□ 0.78
BRF1Q92994 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRF1Q92994 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
BRF1Q92994 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BRF1Q92994 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRF1Q92994 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.95■□□□□ 0.78
BRF1Q92994 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.95■□□□□ 0.78
BRF1Q92994 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRF1Q92994 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRF1Q92994 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BRF1Q92994 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.95■□□□□ 0.78
BRF1Q92994 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.95■□□□□ 0.78
BRF1Q92994 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.95■□□□□ 0.78
BRF1Q92994 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.95■□□□□ 0.78
BRF1Q92994 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC19.95■□□□□ 0.78
BRF1Q92994 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.95■□□□□ 0.78
BRF1Q92994 SLC25A6P2-201ENST00000497974 877 ntBASIC19.95■□□□□ 0.78
BRF1Q92994 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
BRF1Q92994 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
BRF1Q92994 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRF1Q92994 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
BRF1Q92994 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
BRF1Q92994 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRF1Q92994 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRF1Q92994 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.95■□□□□ 0.78
BRF1Q92994 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.95■□□□□ 0.78
BRF1Q92994 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.95■□□□□ 0.78
BRF1Q92994 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRF1Q92994 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
BRF1Q92994 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
BRF1Q92994 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRF1Q92994 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
BRF1Q92994 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BRF1Q92994 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRF1Q92994 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BRF1Q92994 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRF1Q92994 PCDHB19P-201ENST00000570871 2371 ntBASIC19.94■□□□□ 0.78
BRF1Q92994 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
BRF1Q92994 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
BRF1Q92994 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRF1Q92994 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.94■□□□□ 0.78
BRF1Q92994 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
BRF1Q92994 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms