Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC15.62■□□□□ 0.09
HPS1Q92902 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.62■□□□□ 0.09
HPS1Q92902 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.62■□□□□ 0.09
HPS1Q92902 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HPS1Q92902 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.62■□□□□ 0.09
HPS1Q92902 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.62■□□□□ 0.09
HPS1Q92902 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.62■□□□□ 0.09
HPS1Q92902 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.62■□□□□ 0.09
HPS1Q92902 AL450487.1-201ENST00000426799 995 ntBASIC15.62■□□□□ 0.09
HPS1Q92902 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
HPS1Q92902 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
HPS1Q92902 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.62■□□□□ 0.09
HPS1Q92902 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
HPS1Q92902 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC15.62■□□□□ 0.09
HPS1Q92902 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.62■□□□□ 0.09
HPS1Q92902 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.62■□□□□ 0.09
HPS1Q92902 AC010240.3-201ENST00000607688 395 ntBASIC15.62■□□□□ 0.09
HPS1Q92902 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
HPS1Q92902 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.62■□□□□ 0.09
HPS1Q92902 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
HPS1Q92902 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.62■□□□□ 0.09
HPS1Q92902 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.62■□□□□ 0.09
HPS1Q92902 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
HPS1Q92902 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.62■□□□□ 0.09
HPS1Q92902 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.62■□□□□ 0.09
HPS1Q92902 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
HPS1Q92902 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
HPS1Q92902 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS1Q92902 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS1Q92902 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.61■□□□□ 0.09
HPS1Q92902 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.61■□□□□ 0.09
HPS1Q92902 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS1Q92902 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS1Q92902 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC15.61■□□□□ 0.09
HPS1Q92902 AL645929.1-201ENST00000420084 975 ntBASIC15.61■□□□□ 0.09
HPS1Q92902 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC15.61■□□□□ 0.09
HPS1Q92902 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.61■□□□□ 0.09
HPS1Q92902 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.61■□□□□ 0.09
HPS1Q92902 AL691432.3-201ENST00000621860 400 ntBASIC15.61■□□□□ 0.09
HPS1Q92902 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
HPS1Q92902 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS1Q92902 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS1Q92902 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HPS1Q92902 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS1Q92902 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
HPS1Q92902 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS1Q92902 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS1Q92902 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HPS1Q92902 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
HPS1Q92902 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
HPS1Q92902 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS1Q92902 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
HPS1Q92902 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
HPS1Q92902 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
HPS1Q92902 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.6■□□□□ 0.09
HPS1Q92902 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
HPS1Q92902 AP002414.2-201ENST00000591780 3365 ntBASIC15.6■□□□□ 0.09
HPS1Q92902 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.6■□□□□ 0.09
HPS1Q92902 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
HPS1Q92902 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
HPS1Q92902 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
HPS1Q92902 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
HPS1Q92902 DUSP5P1-201ENST00000441325 1139 ntBASIC15.6■□□□□ 0.09
HPS1Q92902 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.6■□□□□ 0.09
HPS1Q92902 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.6■□□□□ 0.09
HPS1Q92902 SEC1P-202ENST00000473944 940 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms