Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
DDX1Q92499 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
DDX1Q92499 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
DDX1Q92499 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX1Q92499 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
DDX1Q92499 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX1Q92499 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX1Q92499 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.05■□□□□ 0.48
DDX1Q92499 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.05■□□□□ 0.48
DDX1Q92499 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
DDX1Q92499 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.05■□□□□ 0.48
DDX1Q92499 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC18.05■□□□□ 0.48
DDX1Q92499 SLC25A6P2-201ENST00000497974 877 ntBASIC18.05■□□□□ 0.48
DDX1Q92499 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
DDX1Q92499 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC18.05■□□□□ 0.48
DDX1Q92499 OR7E14P-202ENST00000530490 1290 ntBASIC18.05■□□□□ 0.48
DDX1Q92499 AC040169.1-201ENST00000565382 521 ntBASIC18.05■□□□□ 0.48
DDX1Q92499 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.05■□□□□ 0.48
DDX1Q92499 AC116407.3-201ENST00000623905 1129 ntBASIC18.05■□□□□ 0.48
DDX1Q92499 UBALD1-205ENST00000590891 2641 ntBASIC18.05■□□□□ 0.48
DDX1Q92499 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DDX1Q92499 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX1Q92499 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX1Q92499 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX1Q92499 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX1Q92499 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DDX1Q92499 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
DDX1Q92499 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX1Q92499 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX1Q92499 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC18.05■□□□□ 0.48
DDX1Q92499 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DDX1Q92499 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX1Q92499 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX1Q92499 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DDX1Q92499 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX1Q92499 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX1Q92499 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
DDX1Q92499 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX1Q92499 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.04■□□□□ 0.48
DDX1Q92499 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
DDX1Q92499 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX1Q92499 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DDX1Q92499 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX1Q92499 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DDX1Q92499 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DDX1Q92499 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.04■□□□□ 0.48
DDX1Q92499 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DDX1Q92499 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX1Q92499 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DDX1Q92499 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.04■□□□□ 0.48
DDX1Q92499 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.04■□□□□ 0.48
DDX1Q92499 AC012640.2-201ENST00000561606 901 ntBASIC18.04■□□□□ 0.48
DDX1Q92499 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.04■□□□□ 0.48
DDX1Q92499 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DDX1Q92499 AC013467.2-201ENST00000605472 835 ntBASIC18.04■□□□□ 0.48
DDX1Q92499 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.04■□□□□ 0.48
DDX1Q92499 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX1Q92499 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.04■□□□□ 0.48
DDX1Q92499 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX1Q92499 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.04■□□□□ 0.48
DDX1Q92499 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
DDX1Q92499 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.04■□□□□ 0.48
DDX1Q92499 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX1Q92499 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX1Q92499 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
DDX1Q92499 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX1Q92499 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX1Q92499 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX1Q92499 TOP3BP1-201ENST00000420768 1380 ntBASIC18.04■□□□□ 0.48
DDX1Q92499 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DDX1Q92499 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.03■□□□□ 0.48
DDX1Q92499 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
DDX1Q92499 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.03■□□□□ 0.48
DDX1Q92499 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
DDX1Q92499 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX1Q92499 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX1Q92499 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.03■□□□□ 0.48
DDX1Q92499 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX1Q92499 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.03■□□□□ 0.48
DDX1Q92499 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX1Q92499 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX1Q92499 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX1Q92499 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DDX1Q92499 AC006277.1-201ENST00000624348 1610 ntBASIC18.03■□□□□ 0.48
DDX1Q92499 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.03■□□□□ 0.48
DDX1Q92499 RPS15P9-201ENST00000494093 319 ntBASIC18.03■□□□□ 0.48
DDX1Q92499 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.03■□□□□ 0.48
DDX1Q92499 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.03■□□□□ 0.48
DDX1Q92499 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.03■□□□□ 0.48
DDX1Q92499 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.03■□□□□ 0.48
DDX1Q92499 AL356488.2-201ENST00000602755 427 ntBASIC18.03■□□□□ 0.48
DDX1Q92499 AC008735.5-201ENST00000623544 497 ntBASIC18.03■□□□□ 0.48
DDX1Q92499 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
DDX1Q92499 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
DDX1Q92499 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
DDX1Q92499 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX1Q92499 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
DDX1Q92499 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX1Q92499 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DDX1Q92499 PI4KAP1-204ENST00000612579 1703 ntBASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms