Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CASKIN1Q8WXD9 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
CASKIN1Q8WXD9 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC26.02■■□□□ 1.76
CASKIN1Q8WXD9 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CASKIN1Q8WXD9 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
CASKIN1Q8WXD9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
CASKIN1Q8WXD9 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
CASKIN1Q8WXD9 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
CASKIN1Q8WXD9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
CASKIN1Q8WXD9 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CASKIN1Q8WXD9 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC26.01■■□□□ 1.75
CASKIN1Q8WXD9 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC26.01■■□□□ 1.75
CASKIN1Q8WXD9 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC26.01■■□□□ 1.75
CASKIN1Q8WXD9 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
CASKIN1Q8WXD9 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC26.01■■□□□ 1.75
CASKIN1Q8WXD9 AL844908.2-201ENST00000609461 460 ntBASIC26.01■■□□□ 1.75
CASKIN1Q8WXD9 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
CASKIN1Q8WXD9 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
CASKIN1Q8WXD9 AF228730.6-201ENST00000641497 218 ntBASIC26.01■■□□□ 1.75
CASKIN1Q8WXD9 AC084121.3-201ENST00000641716 218 ntBASIC26.01■■□□□ 1.75
CASKIN1Q8WXD9 AC105233.6-201ENST00000642093 218 ntBASIC26.01■■□□□ 1.75
CASKIN1Q8WXD9 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 DPM2-202ENST00000373110 738 ntTSL 2 BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 AC015922.1-201ENST00000421102 1152 ntBASIC26■■□□□ 1.75
CASKIN1Q8WXD9 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 SERBP1P5-201ENST00000510079 1181 ntBASIC26■■□□□ 1.75
CASKIN1Q8WXD9 AC190387.1-201ENST00000551683 408 ntBASIC26■■□□□ 1.75
CASKIN1Q8WXD9 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
CASKIN1Q8WXD9 GRAMD4P3-201ENST00000621665 1669 ntBASIC26■■□□□ 1.75
CASKIN1Q8WXD9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CASKIN1Q8WXD9 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
CASKIN1Q8WXD9 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CASKIN1Q8WXD9 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CASKIN1Q8WXD9 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC25.99■■□□□ 1.75
CASKIN1Q8WXD9 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC25.99■■□□□ 1.75
CASKIN1Q8WXD9 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
CASKIN1Q8WXD9 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC25.99■■□□□ 1.75
CASKIN1Q8WXD9 TEX28P1-201ENST00000613479 1221 ntBASIC25.99■■□□□ 1.75
CASKIN1Q8WXD9 TEX28P2-201ENST00000617764 1221 ntBASIC25.99■■□□□ 1.75
CASKIN1Q8WXD9 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC25.99■■□□□ 1.75
CASKIN1Q8WXD9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC25.99■■□□□ 1.75
CASKIN1Q8WXD9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
CASKIN1Q8WXD9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CASKIN1Q8WXD9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
CASKIN1Q8WXD9 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC25.99■■□□□ 1.75
CASKIN1Q8WXD9 TDG-209ENST00000544861 1387 ntTSL 2 BASIC25.99■■□□□ 1.75
CASKIN1Q8WXD9 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC25.99■■□□□ 1.75
CASKIN1Q8WXD9 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 FHL2-212ENST00000607522 759 ntTSL 2 BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 AL133215.2-201ENST00000609242 977 ntBASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 SPTSSB-204ENST00000617024 1292 ntBASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 AC141586.5-201ENST00000624546 2050 ntBASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
CASKIN1Q8WXD9 AC007613.1-201ENST00000572811 2597 ntBASIC25.97■■□□□ 1.75
CASKIN1Q8WXD9 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CASKIN1Q8WXD9 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CASKIN1Q8WXD9 VMO1-203ENST00000416307 712 ntTSL 2 BASIC25.97■■□□□ 1.75
CASKIN1Q8WXD9 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC25.97■■□□□ 1.75
CASKIN1Q8WXD9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC25.97■■□□□ 1.75
CASKIN1Q8WXD9 AC093724.1-201ENST00000448659 1027 ntBASIC25.97■■□□□ 1.75
CASKIN1Q8WXD9 CRB3P1-201ENST00000449338 276 ntBASIC25.97■■□□□ 1.75
CASKIN1Q8WXD9 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC25.97■■□□□ 1.75
CASKIN1Q8WXD9 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
CASKIN1Q8WXD9 AC022144.1-201ENST00000602255 1580 ntBASIC25.97■■□□□ 1.75
CASKIN1Q8WXD9 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
CASKIN1Q8WXD9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
CASKIN1Q8WXD9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC25.97■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms