Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC148Q8NFR7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 KRT8P49-201ENST00000604166 1432 ntBASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCDC148Q8NFR7 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 AC129492.6-201ENST00000611383 1305 ntBASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 TOP3BP1-201ENST00000420768 1380 ntBASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC148Q8NFR7 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 AC104109.2-201ENST00000602919 1418 ntBASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 AP002490.2-201ENST00000524791 560 ntBASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 REXO1L3P-201ENST00000622202 1288 ntBASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC148Q8NFR7 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCDC148Q8NFR7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms