Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NUP35Q8NFH5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
NUP35Q8NFH5 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
NUP35Q8NFH5 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC12.73□□□□□ -0.37
NUP35Q8NFH5 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
NUP35Q8NFH5 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
NUP35Q8NFH5 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NUP35Q8NFH5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NUP35Q8NFH5 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NUP35Q8NFH5 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NUP35Q8NFH5 TNRC18P2-201ENST00000417666 2714 ntBASIC12.73□□□□□ -0.37
NUP35Q8NFH5 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NUP35Q8NFH5 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NUP35Q8NFH5 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC12.73□□□□□ -0.37
NUP35Q8NFH5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NUP35Q8NFH5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
NUP35Q8NFH5 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC12.73□□□□□ -0.37
NUP35Q8NFH5 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NUP35Q8NFH5 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
NUP35Q8NFH5 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 SAPCD2P4-201ENST00000424595 1171 ntBASIC12.72□□□□□ -0.37
NUP35Q8NFH5 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 RNA5SP413-201ENST00000516373 109 ntBASIC12.72□□□□□ -0.37
NUP35Q8NFH5 AC090192.1-201ENST00000517740 490 ntBASIC12.72□□□□□ -0.37
NUP35Q8NFH5 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 CD177P1-201ENST00000606252 935 ntBASIC12.72□□□□□ -0.37
NUP35Q8NFH5 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
NUP35Q8NFH5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC12.71□□□□□ -0.37
NUP35Q8NFH5 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
NUP35Q8NFH5 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NUP35Q8NFH5 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
NUP35Q8NFH5 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NUP35Q8NFH5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.71□□□□□ -0.37
NUP35Q8NFH5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NUP35Q8NFH5 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NUP35Q8NFH5 AC067930.6-201ENST00000623257 4947 ntBASIC12.71□□□□□ -0.37
NUP35Q8NFH5 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NUP35Q8NFH5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC12.71□□□□□ -0.37
NUP35Q8NFH5 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
NUP35Q8NFH5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.71□□□□□ -0.37
NUP35Q8NFH5 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NUP35Q8NFH5 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.71□□□□□ -0.37
NUP35Q8NFH5 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC12.71□□□□□ -0.37
NUP35Q8NFH5 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
NUP35Q8NFH5 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.71□□□□□ -0.37
NUP35Q8NFH5 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
NUP35Q8NFH5 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms