Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LSMEM1Q8N8F7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
LSMEM1Q8N8F7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LSMEM1Q8N8F7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
LSMEM1Q8N8F7 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 TPM1-218ENST00000559281 851 ntTSL 5 BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 AL732292.2-201ENST00000609649 430 ntBASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 AL589182.2-201ENST00000619332 1049 ntBASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 AL355877.3-201ENST00000622820 899 ntBASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 AL021920.2-201ENST00000624828 1351 ntBASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
LSMEM1Q8N8F7 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 BX005266.1-201ENST00000473402 457 ntBASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 MTDHP3-201ENST00000594186 672 ntBASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 PCDHA14-201ENST00000506751 2298 ntBASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
LSMEM1Q8N8F7 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 HYMAI-201ENST00000635591 3347 ntBASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LSMEM1Q8N8F7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms