Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 AL353593.2-201ENST00000602529 1483 ntBASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 STK19B-204ENST00000512515 211 ntBASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NANOGP1Q8N7R0 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 TSPY20P-201ENST00000450910 630 ntBASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 DUX4L17-201ENST00000557360 1267 ntBASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 AC140113.3-201ENST00000605663 199 ntBASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 AC125634.1-201ENST00000438758 1403 ntBASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 KRT17P2-201ENST00000300992 1314 ntBASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NANOGP1Q8N7R0 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NANOGP1Q8N7R0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC15.14■□□□□ 0.01
NANOGP1Q8N7R0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.14■□□□□ 0.01
NANOGP1Q8N7R0 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
NANOGP1Q8N7R0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NANOGP1Q8N7R0 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
NANOGP1Q8N7R0 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms