Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
LINC01561Q8N1V8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 AC002310.6-201ENST00000624451 1377 ntBASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 AL645728.1-201ENST00000366221 2101 ntBASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 AL645929.1-201ENST00000420084 975 ntBASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 ABBA01031661.1-201ENST00000634362 1253 ntBASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 C1R-202ENST00000536053 2347 ntTSL 2 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
LINC01561Q8N1V8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 ME2P1-201ENST00000426028 1970 ntBASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 AP002414.1-201ENST00000391405 1147 ntBASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 AK4P3-201ENST00000418260 669 ntBASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 KRT8P26-201ENST00000534154 1276 ntBASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 DUX4L17-201ENST00000557360 1267 ntBASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 LINC01238-205ENST00000567549 1107 ntBASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 AC012306.2-201ENST00000609350 630 ntBASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC11.42□□□□□ -0.58
LINC01561Q8N1V8 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms