Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AL356488.2-201ENST00000602755 427 ntBASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 AL773604.1-201ENST00000617417 272 ntBASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 GGTLC5P-201ENST00000617623 998 ntBASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CCDC65Q8IXS2 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC65Q8IXS2 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC65Q8IXS2 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC65Q8IXS2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC65Q8IXS2 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC65Q8IXS2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC65Q8IXS2 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC65Q8IXS2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.83■□□□□ 0.61
CCDC65Q8IXS2 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 TPM4P1-201ENST00000436100 807 ntBASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 AC012640.2-201ENST00000561606 901 ntBASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 FAM215A-202ENST00000632077 792 ntBASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 PGM5P2-202ENST00000637225 1043 ntBASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC65Q8IXS2 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 AC008667.4-201ENST00000607370 168 ntBASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 AC005593.1-201ENST00000624894 515 ntBASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 FLJ38576-201ENST00000623820 2459 ntBASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 AP002414.3-201ENST00000589352 1468 ntBASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 AL645728.1-201ENST00000366221 2101 ntBASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC65Q8IXS2 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC65Q8IXS2 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC65Q8IXS2 TOP3BP1-201ENST00000420768 1380 ntBASIC18.81■□□□□ 0.6
CCDC65Q8IXS2 AC002310.6-201ENST00000624451 1377 ntBASIC18.81■□□□□ 0.6
CCDC65Q8IXS2 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms