Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 LINC02228-204ENST00000642115 2962 ntBASIC16.91■□□□□ 0.3
APLFQ8IW19 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APLFQ8IW19 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
APLFQ8IW19 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.91■□□□□ 0.3
APLFQ8IW19 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
APLFQ8IW19 MIR574-201ENST00000385209 96 ntBASIC16.91■□□□□ 0.3
APLFQ8IW19 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APLFQ8IW19 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
APLFQ8IW19 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APLFQ8IW19 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.91■□□□□ 0.3
APLFQ8IW19 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
APLFQ8IW19 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
APLFQ8IW19 AF228730.7-201ENST00000641842 219 ntBASIC16.91■□□□□ 0.3
APLFQ8IW19 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APLFQ8IW19 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.91■□□□□ 0.3
APLFQ8IW19 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.91■□□□□ 0.3
APLFQ8IW19 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APLFQ8IW19 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
APLFQ8IW19 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.91■□□□□ 0.3
APLFQ8IW19 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
APLFQ8IW19 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
APLFQ8IW19 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APLFQ8IW19 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
APLFQ8IW19 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
APLFQ8IW19 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
APLFQ8IW19 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.9■□□□□ 0.3
APLFQ8IW19 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APLFQ8IW19 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APLFQ8IW19 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.9■□□□□ 0.3
APLFQ8IW19 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
APLFQ8IW19 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
APLFQ8IW19 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APLFQ8IW19 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
APLFQ8IW19 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
APLFQ8IW19 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
APLFQ8IW19 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APLFQ8IW19 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APLFQ8IW19 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
APLFQ8IW19 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APLFQ8IW19 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APLFQ8IW19 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.9■□□□□ 0.3
APLFQ8IW19 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
APLFQ8IW19 AL031284.1-201ENST00000419297 478 ntBASIC16.9■□□□□ 0.3
APLFQ8IW19 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.9■□□□□ 0.3
APLFQ8IW19 AC093909.1-201ENST00000504731 1122 ntBASIC16.9■□□□□ 0.3
APLFQ8IW19 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.9■□□□□ 0.3
APLFQ8IW19 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.9■□□□□ 0.3
APLFQ8IW19 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.9■□□□□ 0.3
APLFQ8IW19 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.9■□□□□ 0.3
APLFQ8IW19 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
APLFQ8IW19 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.9■□□□□ 0.3
APLFQ8IW19 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
APLFQ8IW19 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.9■□□□□ 0.3
APLFQ8IW19 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APLFQ8IW19 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APLFQ8IW19 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.9■□□□□ 0.3
APLFQ8IW19 KRT18P55-202ENST00000578578 1546 ntBASIC16.9■□□□□ 0.3
APLFQ8IW19 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.9■□□□□ 0.3
APLFQ8IW19 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APLFQ8IW19 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APLFQ8IW19 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
APLFQ8IW19 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APLFQ8IW19 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
APLFQ8IW19 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
APLFQ8IW19 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
APLFQ8IW19 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
APLFQ8IW19 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
APLFQ8IW19 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
APLFQ8IW19 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
APLFQ8IW19 TSPY26P-202ENST00000565928 3884 ntBASIC16.89■□□□□ 0.29
APLFQ8IW19 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APLFQ8IW19 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
APLFQ8IW19 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
APLFQ8IW19 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APLFQ8IW19 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.89■□□□□ 0.29
APLFQ8IW19 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APLFQ8IW19 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.89■□□□□ 0.29
APLFQ8IW19 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.89■□□□□ 0.29
APLFQ8IW19 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
APLFQ8IW19 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.89■□□□□ 0.29
APLFQ8IW19 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.89■□□□□ 0.29
APLFQ8IW19 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
APLFQ8IW19 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.89■□□□□ 0.29
APLFQ8IW19 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.89■□□□□ 0.29
APLFQ8IW19 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.89■□□□□ 0.29
APLFQ8IW19 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
APLFQ8IW19 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
APLFQ8IW19 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APLFQ8IW19 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APLFQ8IW19 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
APLFQ8IW19 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
APLFQ8IW19 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
APLFQ8IW19 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
APLFQ8IW19 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
APLFQ8IW19 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.89■□□□□ 0.29
APLFQ8IW19 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.88■□□□□ 0.29
APLFQ8IW19 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
APLFQ8IW19 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.88■□□□□ 0.29
APLFQ8IW19 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
APLFQ8IW19 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms