Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.31■□□□□ 0.52
HERC6Q8IVU3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 AC068880.1-201ENST00000507289 2297 ntBASIC18.3■□□□□ 0.52
HERC6Q8IVU3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 MIR346-201ENST00000362234 95 ntBASIC18.3■□□□□ 0.52
HERC6Q8IVU3 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 AC027307.2-201ENST00000591252 911 ntBASIC18.3■□□□□ 0.52
HERC6Q8IVU3 MIR6752-201ENST00000618442 71 ntBASIC18.3■□□□□ 0.52
HERC6Q8IVU3 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 AC020916.1-201ENST00000587762 1774 ntBASIC18.3■□□□□ 0.52
HERC6Q8IVU3 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HERC6Q8IVU3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HERC6Q8IVU3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HERC6Q8IVU3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HERC6Q8IVU3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.29■□□□□ 0.52
HERC6Q8IVU3 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HERC6Q8IVU3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HERC6Q8IVU3 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HERC6Q8IVU3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.29■□□□□ 0.52
HERC6Q8IVU3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HERC6Q8IVU3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.29■□□□□ 0.52
HERC6Q8IVU3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.29■□□□□ 0.52
HERC6Q8IVU3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.29■□□□□ 0.52
HERC6Q8IVU3 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.29■□□□□ 0.52
HERC6Q8IVU3 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
HERC6Q8IVU3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HERC6Q8IVU3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HERC6Q8IVU3 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HERC6Q8IVU3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HERC6Q8IVU3 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 AC027369.6-201ENST00000525520 931 ntBASIC18.28■□□□□ 0.52
HERC6Q8IVU3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 AC073592.8-201ENST00000624126 511 ntBASIC18.28■□□□□ 0.52
HERC6Q8IVU3 AC100757.3-201ENST00000622361 1406 ntBASIC18.28■□□□□ 0.52
HERC6Q8IVU3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HERC6Q8IVU3 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
HERC6Q8IVU3 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms