Protein–RNA interactions for Protein: Q7Z404

TMC4, Transmembrane channel-like protein 4, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMC4Q7Z404 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMC4Q7Z404 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.53■□□□□ 0.88
TMC4Q7Z404 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMC4Q7Z404 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TMC4Q7Z404 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMC4Q7Z404 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMC4Q7Z404 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
TMC4Q7Z404 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC20.52■□□□□ 0.88
TMC4Q7Z404 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.52■□□□□ 0.88
TMC4Q7Z404 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMC4Q7Z404 CALY-202ENST00000368555 783 ntTSL 2 BASIC20.52■□□□□ 0.88
TMC4Q7Z404 FAM220BP-201ENST00000377689 816 ntBASIC20.52■□□□□ 0.88
TMC4Q7Z404 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMC4Q7Z404 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMC4Q7Z404 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TMC4Q7Z404 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC20.52■□□□□ 0.88
TMC4Q7Z404 SATB1-217ENST00000493952 626 ntTSL 3 BASIC20.52■□□□□ 0.88
TMC4Q7Z404 AP005018.1-201ENST00000525475 301 ntBASIC20.52■□□□□ 0.88
TMC4Q7Z404 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMC4Q7Z404 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.52■□□□□ 0.88
TMC4Q7Z404 SIGLEC29P-201ENST00000599873 1114 ntBASIC20.52■□□□□ 0.88
TMC4Q7Z404 AL138828.2-201ENST00000615812 383 ntBASIC20.52■□□□□ 0.88
TMC4Q7Z404 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
TMC4Q7Z404 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMC4Q7Z404 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMC4Q7Z404 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMC4Q7Z404 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC20.52■□□□□ 0.88
TMC4Q7Z404 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMC4Q7Z404 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMC4Q7Z404 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TMC4Q7Z404 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMC4Q7Z404 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.87
TMC4Q7Z404 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
TMC4Q7Z404 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMC4Q7Z404 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.51■□□□□ 0.87
TMC4Q7Z404 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
TMC4Q7Z404 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMC4Q7Z404 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMC4Q7Z404 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMC4Q7Z404 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMC4Q7Z404 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMC4Q7Z404 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMC4Q7Z404 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMC4Q7Z404 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMC4Q7Z404 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMC4Q7Z404 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TMC4Q7Z404 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.51■□□□□ 0.87
TMC4Q7Z404 GK-202ENST00000378941 458 ntTSL 3 BASIC20.51■□□□□ 0.87
TMC4Q7Z404 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMC4Q7Z404 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMC4Q7Z404 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMC4Q7Z404 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.51■□□□□ 0.87
TMC4Q7Z404 AL353705.2-201ENST00000428243 662 ntBASIC20.51■□□□□ 0.87
TMC4Q7Z404 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMC4Q7Z404 AC124947.2-201ENST00000547118 1133 ntBASIC20.51■□□□□ 0.87
TMC4Q7Z404 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMC4Q7Z404 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMC4Q7Z404 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.51■□□□□ 0.87
TMC4Q7Z404 AL662799.1-202ENST00000614205 422 ntBASIC20.51■□□□□ 0.87
TMC4Q7Z404 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TMC4Q7Z404 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TMC4Q7Z404 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.51■□□□□ 0.87
TMC4Q7Z404 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMC4Q7Z404 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMC4Q7Z404 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMC4Q7Z404 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC20.51■□□□□ 0.87
TMC4Q7Z404 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC20.51■□□□□ 0.87
TMC4Q7Z404 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
TMC4Q7Z404 TUBB8P12-201ENST00000308911 1335 ntBASIC20.51■□□□□ 0.87
TMC4Q7Z404 TUBB7P-202ENST00000428444 1305 ntBASIC20.51■□□□□ 0.87
TMC4Q7Z404 TUBB8P7-204ENST00000567960 1332 ntBASIC20.51■□□□□ 0.87
TMC4Q7Z404 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TMC4Q7Z404 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
TMC4Q7Z404 AC108860.2-201ENST00000562760 2183 ntBASIC20.51■□□□□ 0.87
TMC4Q7Z404 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMC4Q7Z404 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMC4Q7Z404 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.5■□□□□ 0.87
TMC4Q7Z404 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC20.5■□□□□ 0.87
TMC4Q7Z404 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC20.5■□□□□ 0.87
TMC4Q7Z404 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMC4Q7Z404 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.5■□□□□ 0.87
TMC4Q7Z404 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMC4Q7Z404 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TMC4Q7Z404 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.5■□□□□ 0.87
TMC4Q7Z404 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TMC4Q7Z404 FOXO1B-201ENST00000504678 1527 ntBASIC20.5■□□□□ 0.87
TMC4Q7Z404 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
TMC4Q7Z404 HNRNPA3P1-201ENST00000401429 1139 ntBASIC20.5■□□□□ 0.87
TMC4Q7Z404 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC20.5■□□□□ 0.87
TMC4Q7Z404 HNRNPA3P5-201ENST00000455201 833 ntBASIC20.5■□□□□ 0.87
TMC4Q7Z404 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC20.5■□□□□ 0.87
TMC4Q7Z404 MPI-209ENST00000564003 1195 ntTSL 2 BASIC20.5■□□□□ 0.87
TMC4Q7Z404 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC20.5■□□□□ 0.87
TMC4Q7Z404 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMC4Q7Z404 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC20.5■□□□□ 0.87
TMC4Q7Z404 AC025048.6-201ENST00000634326 1161 ntBASIC20.5■□□□□ 0.87
TMC4Q7Z404 RAB34-223ENST00000636154 730 ntTSL 2 BASIC20.5■□□□□ 0.87
TMC4Q7Z404 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TMC4Q7Z404 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.5■□□□□ 0.87
TMC4Q7Z404 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms