Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
LCA10Q71F78 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC9.22□□□□□ -0.93
LCA10Q71F78 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC9.22□□□□□ -0.93
LCA10Q71F78 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
LCA10Q71F78 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC9.22□□□□□ -0.93
LCA10Q71F78 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
LCA10Q71F78 KRT8P11-201ENST00000409686 1436 ntBASIC9.22□□□□□ -0.93
LCA10Q71F78 AC112777.1-201ENST00000540175 1423 ntBASIC9.22□□□□□ -0.93
LCA10Q71F78 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC9.22□□□□□ -0.93
LCA10Q71F78 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC9.22□□□□□ -0.93
LCA10Q71F78 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
LCA10Q71F78 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LCA10Q71F78 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
LCA10Q71F78 AL357033.4-201ENST00000617703 1807 ntBASIC9.21□□□□□ -0.93
LCA10Q71F78 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LCA10Q71F78 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LCA10Q71F78 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
LCA10Q71F78 KRT8P32-201ENST00000512863 1461 ntBASIC9.21□□□□□ -0.93
LCA10Q71F78 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
LCA10Q71F78 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC9.21□□□□□ -0.93
LCA10Q71F78 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
LCA10Q71F78 AC073347.1-201ENST00000421633 2643 ntBASIC9.21□□□□□ -0.93
LCA10Q71F78 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LCA10Q71F78 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LCA10Q71F78 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LCA10Q71F78 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
LCA10Q71F78 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC9.21□□□□□ -0.93
LCA10Q71F78 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
LCA10Q71F78 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LCA10Q71F78 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LCA10Q71F78 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC9.21□□□□□ -0.93
LCA10Q71F78 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LCA10Q71F78 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
LCA10Q71F78 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
LCA10Q71F78 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
LCA10Q71F78 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
LCA10Q71F78 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
LCA10Q71F78 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
LCA10Q71F78 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC9.21□□□□□ -0.93
LCA10Q71F78 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
LCA10Q71F78 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC9.21□□□□□ -0.94
LCA10Q71F78 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC9.21□□□□□ -0.94
LCA10Q71F78 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
LCA10Q71F78 POU5F1P3-201ENST00000428824 1078 ntBASIC9.21□□□□□ -0.94
LCA10Q71F78 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 GLRB-205ENST00000512619 728 ntTSL 3 BASIC9.21□□□□□ -0.94
LCA10Q71F78 PRSS44-201ENST00000515154 1146 ntBASIC9.21□□□□□ -0.94
LCA10Q71F78 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC9.21□□□□□ -0.94
LCA10Q71F78 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC9.21□□□□□ -0.94
LCA10Q71F78 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC9.21□□□□□ -0.94
LCA10Q71F78 AC008403.3-201ENST00000598924 454 ntBASIC9.21□□□□□ -0.94
LCA10Q71F78 MTDHP1-201ENST00000605323 784 ntBASIC9.21□□□□□ -0.94
LCA10Q71F78 AC069544.1-201ENST00000609399 999 ntBASIC9.21□□□□□ -0.94
LCA10Q71F78 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC9.21□□□□□ -0.94
LCA10Q71F78 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 GSN-203ENST00000373808 2664 ntTSL 2 BASIC9.21□□□□□ -0.94
LCA10Q71F78 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC9.21□□□□□ -0.94
LCA10Q71F78 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC9.21□□□□□ -0.94
LCA10Q71F78 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC9.21□□□□□ -0.94
LCA10Q71F78 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC9.21□□□□□ -0.94
LCA10Q71F78 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC9.21□□□□□ -0.94
LCA10Q71F78 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
LCA10Q71F78 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
LCA10Q71F78 PGR-210ENST00000619228 3038 ntTSL 5 BASIC9.21□□□□□ -0.94
LCA10Q71F78 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
LCA10Q71F78 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC9.2□□□□□ -0.94
LCA10Q71F78 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
LCA10Q71F78 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms