Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.85■□□□□ 0.29
ZNF549Q6P9A3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.85■□□□□ 0.29
ZNF549Q6P9A3 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
ZNF549Q6P9A3 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF549Q6P9A3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
ZNF549Q6P9A3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
ZNF549Q6P9A3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
ZNF549Q6P9A3 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.85■□□□□ 0.29
ZNF549Q6P9A3 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.85■□□□□ 0.29
ZNF549Q6P9A3 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.85■□□□□ 0.29
ZNF549Q6P9A3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF549Q6P9A3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF549Q6P9A3 AC006504.4-201ENST00000592118 1568 ntBASIC16.85■□□□□ 0.29
ZNF549Q6P9A3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF549Q6P9A3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF549Q6P9A3 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 PCDHB19P-201ENST00000570871 2371 ntBASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 PTCHD3P3-201ENST00000403073 906 ntBASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 SCARNA2-201ENST00000458748 420 ntBASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 LINC01711-201ENST00000598340 967 ntBASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF549Q6P9A3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
ZNF549Q6P9A3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
ZNF549Q6P9A3 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 ELK2BP-201ENST00000415014 1224 ntBASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 AL391256.1-201ENST00000443260 1855 ntBASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 EMBP1-201ENST00000458200 901 ntBASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF549Q6P9A3 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF549Q6P9A3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF549Q6P9A3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ZNF549Q6P9A3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF549Q6P9A3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF549Q6P9A3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF549Q6P9A3 HLA-A-202ENST00000376806 1854 ntBASIC16.82■□□□□ 0.28
ZNF549Q6P9A3 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF549Q6P9A3 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF549Q6P9A3 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF549Q6P9A3 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF549Q6P9A3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF549Q6P9A3 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF549Q6P9A3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF549Q6P9A3 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms