Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.04■□□□□ 0.16
LPCAT4Q643R3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 AP002490.2-201ENST00000524791 560 ntBASIC16.03■□□□□ 0.16
LPCAT4Q643R3 EMC9-206ENST00000560403 872 ntTSL 2 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 AL353719.1-201ENST00000566847 864 ntBASIC16.03■□□□□ 0.16
LPCAT4Q643R3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.03■□□□□ 0.16
LPCAT4Q643R3 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LPCAT4Q643R3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 PPT1-215ENST00000641471 2368 ntBASIC16.02■□□□□ 0.16
LPCAT4Q643R3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 NORAD-201ENST00000565493 5339 ntBASIC16.02■□□□□ 0.16
LPCAT4Q643R3 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 PVRIG2P-201ENST00000435460 978 ntBASIC16.02■□□□□ 0.16
LPCAT4Q643R3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.02■□□□□ 0.16
LPCAT4Q643R3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC16.02■□□□□ 0.15
LPCAT4Q643R3 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LPCAT4Q643R3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.15
LPCAT4Q643R3 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LPCAT4Q643R3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LPCAT4Q643R3 AP005117.1-202ENST00000581724 1908 ntBASIC16.02■□□□□ 0.15
LPCAT4Q643R3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.01■□□□□ 0.15
LPCAT4Q643R3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms