Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 AP001350.2-201ENST00000625104 1094 ntBASIC17.91■□□□□ 0.46
VARS2Q5ST30 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 LTB4R2-202ENST00000528054 3092 ntBASIC17.91■□□□□ 0.46
VARS2Q5ST30 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.91■□□□□ 0.46
VARS2Q5ST30 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
VARS2Q5ST30 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.9■□□□□ 0.46
VARS2Q5ST30 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VARS2Q5ST30 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARS2Q5ST30 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARS2Q5ST30 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARS2Q5ST30 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.9■□□□□ 0.46
VARS2Q5ST30 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARS2Q5ST30 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.9■□□□□ 0.46
VARS2Q5ST30 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARS2Q5ST30 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.9■□□□□ 0.46
VARS2Q5ST30 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.9■□□□□ 0.46
VARS2Q5ST30 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARS2Q5ST30 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARS2Q5ST30 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VARS2Q5ST30 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.9■□□□□ 0.46
VARS2Q5ST30 AC069335.1-201ENST00000489972 472 ntBASIC17.9■□□□□ 0.46
VARS2Q5ST30 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
VARS2Q5ST30 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.9■□□□□ 0.46
VARS2Q5ST30 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.9■□□□□ 0.46
VARS2Q5ST30 AC025678.2-201ENST00000562061 970 ntBASIC17.9■□□□□ 0.46
VARS2Q5ST30 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
VARS2Q5ST30 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC17.9■□□□□ 0.46
VARS2Q5ST30 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC17.9■□□□□ 0.46
VARS2Q5ST30 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARS2Q5ST30 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
VARS2Q5ST30 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.9■□□□□ 0.46
VARS2Q5ST30 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
VARS2Q5ST30 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC17.9■□□□□ 0.46
VARS2Q5ST30 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARS2Q5ST30 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
VARS2Q5ST30 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARS2Q5ST30 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARS2Q5ST30 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
VARS2Q5ST30 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.89■□□□□ 0.46
VARS2Q5ST30 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VARS2Q5ST30 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
VARS2Q5ST30 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARS2Q5ST30 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARS2Q5ST30 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
VARS2Q5ST30 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VARS2Q5ST30 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VARS2Q5ST30 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.89■□□□□ 0.45
VARS2Q5ST30 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.89■□□□□ 0.45
VARS2Q5ST30 SPCS2P4-201ENST00000436160 681 ntBASIC17.89■□□□□ 0.45
VARS2Q5ST30 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.89■□□□□ 0.45
VARS2Q5ST30 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VARS2Q5ST30 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.89■□□□□ 0.45
VARS2Q5ST30 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VARS2Q5ST30 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.45
VARS2Q5ST30 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VARS2Q5ST30 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
VARS2Q5ST30 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.89■□□□□ 0.45
VARS2Q5ST30 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.89■□□□□ 0.45
VARS2Q5ST30 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARS2Q5ST30 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
VARS2Q5ST30 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
VARS2Q5ST30 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
VARS2Q5ST30 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARS2Q5ST30 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARS2Q5ST30 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARS2Q5ST30 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
VARS2Q5ST30 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
VARS2Q5ST30 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARS2Q5ST30 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARS2Q5ST30 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARS2Q5ST30 LINC00896-202ENST00000609602 2128 ntBASIC17.89■□□□□ 0.45
VARS2Q5ST30 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
VARS2Q5ST30 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.89■□□□□ 0.45
VARS2Q5ST30 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
VARS2Q5ST30 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARS2Q5ST30 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
VARS2Q5ST30 RHBDF1P1-201ENST00000427504 1941 ntBASIC17.88■□□□□ 0.45
VARS2Q5ST30 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VARS2Q5ST30 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VARS2Q5ST30 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.88■□□□□ 0.45
VARS2Q5ST30 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
VARS2Q5ST30 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
VARS2Q5ST30 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
VARS2Q5ST30 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms