Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO4Q2I0M5 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 AC016027.1-202ENST00000607927 1699 ntBASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 MYCLP2-201ENST00000449268 967 ntBASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 RHOQP1-201ENST00000555758 579 ntBASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC16.31■□□□□ 0.2
RSPO4Q2I0M5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 AL139099.5-201ENST00000635274 300 ntBASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
RSPO4Q2I0M5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 AC018470.1-201ENST00000624790 3129 ntBASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.29■□□□□ 0.2
RSPO4Q2I0M5 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms