Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EFNB3Q15768 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EFNB3Q15768 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EFNB3Q15768 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.44□□□□□ -0.1
EFNB3Q15768 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.44□□□□□ -0.1
EFNB3Q15768 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EFNB3Q15768 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.44□□□□□ -0.1
EFNB3Q15768 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
EFNB3Q15768 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.44□□□□□ -0.1
EFNB3Q15768 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.44□□□□□ -0.1
EFNB3Q15768 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.44□□□□□ -0.1
EFNB3Q15768 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.44□□□□□ -0.1
EFNB3Q15768 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.44□□□□□ -0.1
EFNB3Q15768 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
EFNB3Q15768 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
EFNB3Q15768 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
EFNB3Q15768 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.44□□□□□ -0.1
EFNB3Q15768 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
EFNB3Q15768 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.44□□□□□ -0.1
EFNB3Q15768 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
EFNB3Q15768 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EFNB3Q15768 FRMD8P1-201ENST00000440433 1524 ntBASIC14.44□□□□□ -0.1
EFNB3Q15768 PCDHA12-202ENST00000613593 2588 ntBASIC14.44□□□□□ -0.1
EFNB3Q15768 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EFNB3Q15768 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EFNB3Q15768 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EFNB3Q15768 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EFNB3Q15768 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EFNB3Q15768 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EFNB3Q15768 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
EFNB3Q15768 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
EFNB3Q15768 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
EFNB3Q15768 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.43□□□□□ -0.1
EFNB3Q15768 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.43□□□□□ -0.1
EFNB3Q15768 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.43□□□□□ -0.1
EFNB3Q15768 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.43□□□□□ -0.1
EFNB3Q15768 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.43□□□□□ -0.1
EFNB3Q15768 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.43□□□□□ -0.1
EFNB3Q15768 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.43□□□□□ -0.1
EFNB3Q15768 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 AC012569.1-201ENST00000591191 1524 ntBASIC14.43□□□□□ -0.1
EFNB3Q15768 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC14.43□□□□□ -0.1
EFNB3Q15768 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 CNN2P11-201ENST00000429351 262 ntBASIC14.43□□□□□ -0.1
EFNB3Q15768 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.43□□□□□ -0.1
EFNB3Q15768 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.43□□□□□ -0.1
EFNB3Q15768 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.43□□□□□ -0.1
EFNB3Q15768 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
EFNB3Q15768 AP000344.2-201ENST00000512987 629 ntBASIC14.43□□□□□ -0.1
EFNB3Q15768 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.43□□□□□ -0.1
EFNB3Q15768 AC124947.2-201ENST00000547118 1133 ntBASIC14.43□□□□□ -0.1
EFNB3Q15768 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 DUX4L17-201ENST00000557360 1267 ntBASIC14.43□□□□□ -0.1
EFNB3Q15768 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
EFNB3Q15768 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
EFNB3Q15768 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
EFNB3Q15768 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 AC092919.2-201ENST00000623631 1645 ntBASIC14.43□□□□□ -0.1
EFNB3Q15768 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.43□□□□□ -0.1
EFNB3Q15768 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
EFNB3Q15768 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
EFNB3Q15768 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
EFNB3Q15768 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EFNB3Q15768 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
EFNB3Q15768 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.42□□□□□ -0.1
EFNB3Q15768 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
EFNB3Q15768 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
EFNB3Q15768 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.42□□□□□ -0.1
EFNB3Q15768 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
EFNB3Q15768 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.42□□□□□ -0.1
EFNB3Q15768 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
EFNB3Q15768 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.42□□□□□ -0.1
EFNB3Q15768 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 AL121761.2-201ENST00000598007 1648 ntBASIC14.42□□□□□ -0.1
EFNB3Q15768 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EFNB3Q15768 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms