Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CDH17Q12864 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.15■□□□□ 0.34
CDH17Q12864 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CDH17Q12864 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH17Q12864 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH17Q12864 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH17Q12864 AC092171.3-201ENST00000610122 2651 ntBASIC17.15■□□□□ 0.34
CDH17Q12864 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH17Q12864 AL603756.1-201ENST00000606511 2163 ntBASIC17.15■□□□□ 0.34
CDH17Q12864 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH17Q12864 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH17Q12864 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH17Q12864 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CDH17Q12864 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH17Q12864 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH17Q12864 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH17Q12864 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH17Q12864 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH17Q12864 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH17Q12864 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH17Q12864 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH17Q12864 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH17Q12864 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CDH17Q12864 LAGE3P1-201ENST00000425356 484 ntBASIC17.14■□□□□ 0.33
CDH17Q12864 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.14■□□□□ 0.33
CDH17Q12864 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH17Q12864 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH17Q12864 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH17Q12864 AC006557.2-201ENST00000592985 1240 ntBASIC17.14■□□□□ 0.33
CDH17Q12864 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDH17Q12864 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDH17Q12864 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH17Q12864 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH17Q12864 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH17Q12864 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CDH17Q12864 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CDH17Q12864 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH17Q12864 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CDH17Q12864 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CDH17Q12864 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH17Q12864 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH17Q12864 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CDH17Q12864 HLA-A-202ENST00000376806 1854 ntBASIC17.14■□□□□ 0.33
CDH17Q12864 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CDH17Q12864 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH17Q12864 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.14■□□□□ 0.33
CDH17Q12864 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CDH17Q12864 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH17Q12864 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH17Q12864 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH17Q12864 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH17Q12864 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH17Q12864 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH17Q12864 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH17Q12864 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
CDH17Q12864 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDH17Q12864 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH17Q12864 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH17Q12864 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH17Q12864 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH17Q12864 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH17Q12864 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH17Q12864 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.13■□□□□ 0.33
CDH17Q12864 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH17Q12864 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDH17Q12864 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.13■□□□□ 0.33
CDH17Q12864 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH17Q12864 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CDH17Q12864 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH17Q12864 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH17Q12864 AC107918.4-202ENST00000641623 219 ntBASIC17.13■□□□□ 0.33
CDH17Q12864 AF228730.7-201ENST00000641842 219 ntBASIC17.13■□□□□ 0.33
CDH17Q12864 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CDH17Q12864 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH17Q12864 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDH17Q12864 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH17Q12864 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CDH17Q12864 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH17Q12864 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH17Q12864 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDH17Q12864 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CDH17Q12864 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CDH17Q12864 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CDH17Q12864 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH17Q12864 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.13■□□□□ 0.33
CDH17Q12864 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
CDH17Q12864 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CDH17Q12864 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.13■□□□□ 0.33
CDH17Q12864 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH17Q12864 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH17Q12864 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH17Q12864 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.12■□□□□ 0.33
CDH17Q12864 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.12■□□□□ 0.33
CDH17Q12864 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDH17Q12864 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDH17Q12864 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms