Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SSRP1Q08945 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SSRP1Q08945 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.69■□□□□ 0.74
SSRP1Q08945 AL645728.1-201ENST00000366221 2101 ntBASIC19.69■□□□□ 0.74
SSRP1Q08945 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
SSRP1Q08945 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSRP1Q08945 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.69■□□□□ 0.74
SSRP1Q08945 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SSRP1Q08945 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.68■□□□□ 0.74
SSRP1Q08945 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSRP1Q08945 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.68■□□□□ 0.74
SSRP1Q08945 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.68■□□□□ 0.74
SSRP1Q08945 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.68■□□□□ 0.74
SSRP1Q08945 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSRP1Q08945 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSRP1Q08945 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SSRP1Q08945 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSRP1Q08945 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSRP1Q08945 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.68■□□□□ 0.74
SSRP1Q08945 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC19.68■□□□□ 0.74
SSRP1Q08945 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.68■□□□□ 0.74
SSRP1Q08945 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.68■□□□□ 0.74
SSRP1Q08945 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.68■□□□□ 0.74
SSRP1Q08945 AC117500.6-201ENST00000624871 588 ntBASIC19.68■□□□□ 0.74
SSRP1Q08945 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSRP1Q08945 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SSRP1Q08945 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSRP1Q08945 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSRP1Q08945 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.68■□□□□ 0.74
SSRP1Q08945 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SSRP1Q08945 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.68■□□□□ 0.74
SSRP1Q08945 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSRP1Q08945 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSRP1Q08945 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SSRP1Q08945 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SSRP1Q08945 TOP3BP1-201ENST00000420768 1380 ntBASIC19.68■□□□□ 0.74
SSRP1Q08945 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSRP1Q08945 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSRP1Q08945 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSRP1Q08945 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SSRP1Q08945 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SSRP1Q08945 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSRP1Q08945 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSRP1Q08945 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSRP1Q08945 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSRP1Q08945 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSRP1Q08945 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSRP1Q08945 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSRP1Q08945 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSRP1Q08945 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSRP1Q08945 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSRP1Q08945 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.67■□□□□ 0.74
SSRP1Q08945 AC093909.1-201ENST00000504731 1122 ntBASIC19.67■□□□□ 0.74
SSRP1Q08945 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSRP1Q08945 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.67■□□□□ 0.74
SSRP1Q08945 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.67■□□□□ 0.74
SSRP1Q08945 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
SSRP1Q08945 AL121894.2-201ENST00000602977 491 ntBASIC19.67■□□□□ 0.74
SSRP1Q08945 REXO1L3P-201ENST00000622202 1288 ntBASIC19.67■□□□□ 0.74
SSRP1Q08945 AC116407.3-201ENST00000623905 1129 ntBASIC19.67■□□□□ 0.74
SSRP1Q08945 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
SSRP1Q08945 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSRP1Q08945 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSRP1Q08945 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSRP1Q08945 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SSRP1Q08945 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSRP1Q08945 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.67■□□□□ 0.74
SSRP1Q08945 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SSRP1Q08945 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SSRP1Q08945 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SSRP1Q08945 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSRP1Q08945 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSRP1Q08945 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SSRP1Q08945 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSRP1Q08945 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSRP1Q08945 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC19.66■□□□□ 0.74
SSRP1Q08945 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSRP1Q08945 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC19.66■□□□□ 0.74
SSRP1Q08945 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.66■□□□□ 0.74
SSRP1Q08945 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSRP1Q08945 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.66■□□□□ 0.74
SSRP1Q08945 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.66■□□□□ 0.74
SSRP1Q08945 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SSRP1Q08945 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.66■□□□□ 0.74
SSRP1Q08945 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSRP1Q08945 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.66■□□□□ 0.74
SSRP1Q08945 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SSRP1Q08945 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.66■□□□□ 0.74
SSRP1Q08945 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.66■□□□□ 0.74
SSRP1Q08945 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC19.66■□□□□ 0.74
SSRP1Q08945 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSRP1Q08945 AL391256.1-201ENST00000443260 1855 ntBASIC19.66■□□□□ 0.74
SSRP1Q08945 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSRP1Q08945 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SSRP1Q08945 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSRP1Q08945 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSRP1Q08945 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSRP1Q08945 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SSRP1Q08945 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSRP1Q08945 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms