Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX1P83916 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX1P83916 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX1P83916 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.76■□□□□ 0.43
CBX1P83916 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX1P83916 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CBX1P83916 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.76■□□□□ 0.43
CBX1P83916 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.76■□□□□ 0.43
CBX1P83916 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX1P83916 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC17.76■□□□□ 0.43
CBX1P83916 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC17.76■□□□□ 0.43
CBX1P83916 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.76■□□□□ 0.43
CBX1P83916 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX1P83916 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CBX1P83916 AL024508.2-201ENST00000607749 1894 ntBASIC17.75■□□□□ 0.43
CBX1P83916 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC17.75■□□□□ 0.43
CBX1P83916 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CBX1P83916 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CBX1P83916 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CBX1P83916 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.75■□□□□ 0.43
CBX1P83916 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CBX1P83916 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CBX1P83916 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CBX1P83916 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.75■□□□□ 0.43
CBX1P83916 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC17.75■□□□□ 0.43
CBX1P83916 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC17.75■□□□□ 0.43
CBX1P83916 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CBX1P83916 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC17.75■□□□□ 0.43
CBX1P83916 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CBX1P83916 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC17.75■□□□□ 0.43
CBX1P83916 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.75■□□□□ 0.43
CBX1P83916 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CBX1P83916 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CBX1P83916 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.75■□□□□ 0.43
CBX1P83916 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.75■□□□□ 0.43
CBX1P83916 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.75■□□□□ 0.43
CBX1P83916 DUX4L16-201ENST00000555130 1264 ntBASIC17.75■□□□□ 0.43
CBX1P83916 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.75■□□□□ 0.43
CBX1P83916 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.75■□□□□ 0.43
CBX1P83916 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.75■□□□□ 0.43
CBX1P83916 NTF6G-201ENST00000591094 616 ntBASIC17.75■□□□□ 0.43
CBX1P83916 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CBX1P83916 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CBX1P83916 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.75■□□□□ 0.43
CBX1P83916 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.75■□□□□ 0.43
CBX1P83916 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CBX1P83916 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
CBX1P83916 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CBX1P83916 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CBX1P83916 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CBX1P83916 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CBX1P83916 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CBX1P83916 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.75■□□□□ 0.43
CBX1P83916 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CBX1P83916 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX1P83916 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CBX1P83916 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC17.74■□□□□ 0.43
CBX1P83916 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CBX1P83916 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX1P83916 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX1P83916 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CBX1P83916 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX1P83916 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX1P83916 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX1P83916 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX1P83916 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CBX1P83916 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CBX1P83916 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CBX1P83916 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.74■□□□□ 0.43
CBX1P83916 MCCD1P1-208ENST00000445732 328 ntBASIC17.74■□□□□ 0.43
CBX1P83916 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC17.74■□□□□ 0.43
CBX1P83916 AC124947.2-201ENST00000547118 1133 ntBASIC17.74■□□□□ 0.43
CBX1P83916 MAX-217ENST00000557277 728 ntTSL 3 BASIC17.74■□□□□ 0.43
CBX1P83916 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.74■□□□□ 0.43
CBX1P83916 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.74■□□□□ 0.43
CBX1P83916 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CBX1P83916 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.74■□□□□ 0.43
CBX1P83916 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CBX1P83916 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX1P83916 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX1P83916 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
CBX1P83916 SSR4P1-203ENST00000599569 2260 ntBASIC17.74■□□□□ 0.43
CBX1P83916 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.74■□□□□ 0.43
CBX1P83916 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CBX1P83916 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.74■□□□□ 0.43
CBX1P83916 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX1P83916 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX1P83916 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.74■□□□□ 0.43
CBX1P83916 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CBX1P83916 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CBX1P83916 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX1P83916 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CBX1P83916 USP28-214ENST00000545540 3431 ntTSL 2 BASIC17.73■□□□□ 0.43
CBX1P83916 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.73■□□□□ 0.43
CBX1P83916 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.73■□□□□ 0.43
CBX1P83916 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CBX1P83916 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.73■□□□□ 0.43
CBX1P83916 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CBX1P83916 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
CBX1P83916 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms