Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
IRX4P78413 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.71■□□□□ 0.43
IRX4P78413 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX4P78413 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
IRX4P78413 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX4P78413 UBALD1-205ENST00000590891 2641 ntBASIC17.71■□□□□ 0.43
IRX4P78413 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX4P78413 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX4P78413 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
IRX4P78413 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IRX4P78413 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX4P78413 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IRX4P78413 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.71■□□□□ 0.43
IRX4P78413 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IRX4P78413 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
IRX4P78413 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
IRX4P78413 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.71■□□□□ 0.43
IRX4P78413 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX4P78413 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.71■□□□□ 0.43
IRX4P78413 AC211486.1-202ENST00000416371 468 ntBASIC17.71■□□□□ 0.43
IRX4P78413 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.71■□□□□ 0.43
IRX4P78413 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.71■□□□□ 0.43
IRX4P78413 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.71■□□□□ 0.43
IRX4P78413 AC211476.1-201ENST00000503899 468 ntBASIC17.71■□□□□ 0.43
IRX4P78413 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX4P78413 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
IRX4P78413 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX4P78413 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX4P78413 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.71■□□□□ 0.43
IRX4P78413 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX4P78413 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
IRX4P78413 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC17.71■□□□□ 0.43
IRX4P78413 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX4P78413 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX4P78413 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX4P78413 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IRX4P78413 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
IRX4P78413 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
IRX4P78413 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
IRX4P78413 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
IRX4P78413 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
IRX4P78413 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IRX4P78413 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX4P78413 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
IRX4P78413 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
IRX4P78413 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
IRX4P78413 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
IRX4P78413 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IRX4P78413 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX4P78413 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
IRX4P78413 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IRX4P78413 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX4P78413 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX4P78413 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
IRX4P78413 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX4P78413 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
IRX4P78413 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.7■□□□□ 0.42
IRX4P78413 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.7■□□□□ 0.42
IRX4P78413 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
IRX4P78413 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.7■□□□□ 0.42
IRX4P78413 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IRX4P78413 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX4P78413 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.7■□□□□ 0.42
IRX4P78413 AC009947.1-201ENST00000444350 727 ntBASIC17.7■□□□□ 0.42
IRX4P78413 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.7■□□□□ 0.42
IRX4P78413 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.7■□□□□ 0.42
IRX4P78413 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.7■□□□□ 0.42
IRX4P78413 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX4P78413 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.7■□□□□ 0.42
IRX4P78413 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.7■□□□□ 0.42
IRX4P78413 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.7■□□□□ 0.42
IRX4P78413 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.7■□□□□ 0.42
IRX4P78413 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.7■□□□□ 0.42
IRX4P78413 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
IRX4P78413 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IRX4P78413 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.7■□□□□ 0.42
IRX4P78413 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
IRX4P78413 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
IRX4P78413 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
IRX4P78413 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.7■□□□□ 0.42
IRX4P78413 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
IRX4P78413 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
IRX4P78413 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
IRX4P78413 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IRX4P78413 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
IRX4P78413 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.7■□□□□ 0.42
IRX4P78413 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
IRX4P78413 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.7■□□□□ 0.42
IRX4P78413 KRT18P28-201ENST00000453838 1332 ntBASIC17.7■□□□□ 0.42
IRX4P78413 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.7■□□□□ 0.42
IRX4P78413 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
IRX4P78413 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IRX4P78413 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
IRX4P78413 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IRX4P78413 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.69■□□□□ 0.42
IRX4P78413 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
IRX4P78413 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IRX4P78413 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.69■□□□□ 0.42
IRX4P78413 REXO1L11P-201ENST00000620964 1927 ntBASIC17.69■□□□□ 0.42
IRX4P78413 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms