Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL049757.1-201ENST00000616842 1596 ntBASIC19.08■□□□□ 0.65
TPM4P67936 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
TPM4P67936 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM4P67936 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
TPM4P67936 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TPM4P67936 STK19B-204ENST00000512515 211 ntBASIC19.08■□□□□ 0.64
TPM4P67936 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TPM4P67936 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.08■□□□□ 0.64
TPM4P67936 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.08■□□□□ 0.64
TPM4P67936 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.08■□□□□ 0.64
TPM4P67936 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM4P67936 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM4P67936 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM4P67936 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM4P67936 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM4P67936 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM4P67936 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC19.08■□□□□ 0.64
TPM4P67936 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC19.08■□□□□ 0.64
TPM4P67936 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC19.08■□□□□ 0.64
TPM4P67936 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM4P67936 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TPM4P67936 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TPM4P67936 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TPM4P67936 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM4P67936 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM4P67936 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.08■□□□□ 0.64
TPM4P67936 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TPM4P67936 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM4P67936 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM4P67936 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TPM4P67936 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM4P67936 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.07■□□□□ 0.64
TPM4P67936 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM4P67936 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM4P67936 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.07■□□□□ 0.64
TPM4P67936 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TPM4P67936 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TPM4P67936 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM4P67936 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.07■□□□□ 0.64
TPM4P67936 FAM220CP-201ENST00000395253 831 ntBASIC19.07■□□□□ 0.64
TPM4P67936 GUSBP12-201ENST00000513727 720 ntBASIC19.07■□□□□ 0.64
TPM4P67936 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TPM4P67936 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.07■□□□□ 0.64
TPM4P67936 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.07■□□□□ 0.64
TPM4P67936 AC145285.6-201ENST00000604632 637 ntBASIC19.07■□□□□ 0.64
TPM4P67936 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.07■□□□□ 0.64
TPM4P67936 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.07■□□□□ 0.64
TPM4P67936 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM4P67936 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TPM4P67936 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM4P67936 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM4P67936 AL135999.2-201ENST00000622438 1686 ntBASIC19.07■□□□□ 0.64
TPM4P67936 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TPM4P67936 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.07■□□□□ 0.64
TPM4P67936 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TPM4P67936 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TPM4P67936 Z83836.1-201ENST00000624605 1642 ntBASIC19.07■□□□□ 0.64
TPM4P67936 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC19.07■□□□□ 0.64
TPM4P67936 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TPM4P67936 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TPM4P67936 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.06■□□□□ 0.64
TPM4P67936 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.06■□□□□ 0.64
TPM4P67936 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TPM4P67936 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC19.06■□□□□ 0.64
TPM4P67936 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TPM4P67936 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TPM4P67936 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TPM4P67936 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TPM4P67936 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TPM4P67936 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.06■□□□□ 0.64
TPM4P67936 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.06■□□□□ 0.64
TPM4P67936 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 AC011558.1-201ENST00000623459 338 ntBASIC19.06■□□□□ 0.64
TPM4P67936 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC19.06■□□□□ 0.64
TPM4P67936 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 KRT8P10-201ENST00000450021 1447 ntBASIC19.06■□□□□ 0.64
TPM4P67936 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.06■□□□□ 0.64
TPM4P67936 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TPM4P67936 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.05■□□□□ 0.64
TPM4P67936 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TPM4P67936 AL391256.1-201ENST00000443260 1855 ntBASIC19.05■□□□□ 0.64
TPM4P67936 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TPM4P67936 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms