Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS1BP61024 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CKS1BP61024 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CKS1BP61024 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC11.98□□□□□ -0.49
CKS1BP61024 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC11.98□□□□□ -0.49
CKS1BP61024 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS1BP61024 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC11.98□□□□□ -0.49
CKS1BP61024 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC11.98□□□□□ -0.49
CKS1BP61024 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC11.98□□□□□ -0.49
CKS1BP61024 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
CKS1BP61024 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CKS1BP61024 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS1BP61024 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS1BP61024 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC11.98□□□□□ -0.49
CKS1BP61024 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
CKS1BP61024 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
CKS1BP61024 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
CKS1BP61024 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC11.98□□□□□ -0.49
CKS1BP61024 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
CKS1BP61024 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC11.97□□□□□ -0.49
CKS1BP61024 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC11.97□□□□□ -0.49
CKS1BP61024 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC11.97□□□□□ -0.49
CKS1BP61024 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CKS1BP61024 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC11.97□□□□□ -0.49
CKS1BP61024 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC11.97□□□□□ -0.49
CKS1BP61024 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 DUTP2-201ENST00000519164 463 ntBASIC11.97□□□□□ -0.49
CKS1BP61024 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC11.97□□□□□ -0.49
CKS1BP61024 BX088651.1-201ENST00000540551 451 ntBASIC11.97□□□□□ -0.49
CKS1BP61024 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC11.97□□□□□ -0.49
CKS1BP61024 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 AL359736.2-201ENST00000621992 437 ntBASIC11.97□□□□□ -0.49
CKS1BP61024 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC11.97□□□□□ -0.49
CKS1BP61024 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC11.97□□□□□ -0.49
CKS1BP61024 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC11.97□□□□□ -0.49
CKS1BP61024 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CKS1BP61024 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
CKS1BP61024 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC11.97□□□□□ -0.49
CKS1BP61024 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC11.97□□□□□ -0.49
CKS1BP61024 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 AL023775.1-201ENST00000454907 1746 ntBASIC11.97□□□□□ -0.49
CKS1BP61024 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC11.97□□□□□ -0.49
CKS1BP61024 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CKS1BP61024 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC11.97□□□□□ -0.49
CKS1BP61024 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CKS1BP61024 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CKS1BP61024 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
CKS1BP61024 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
CKS1BP61024 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CKS1BP61024 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
CKS1BP61024 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
CKS1BP61024 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CKS1BP61024 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
CKS1BP61024 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC11.96□□□□□ -0.49
CKS1BP61024 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CKS1BP61024 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CKS1BP61024 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CKS1BP61024 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC11.96□□□□□ -0.49
CKS1BP61024 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CKS1BP61024 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CKS1BP61024 AL024508.2-201ENST00000607749 1894 ntBASIC11.96□□□□□ -0.49
CKS1BP61024 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CKS1BP61024 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
CKS1BP61024 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CKS1BP61024 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CKS1BP61024 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
CKS1BP61024 KRT18P29-201ENST00000397031 1267 ntBASIC11.96□□□□□ -0.49
CKS1BP61024 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC11.96□□□□□ -0.49
CKS1BP61024 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC11.96□□□□□ -0.49
CKS1BP61024 PHB2-202ENST00000440277 996 ntTSL 5 BASIC11.96□□□□□ -0.49
CKS1BP61024 AP003041.3-201ENST00000527151 707 ntBASIC11.96□□□□□ -0.49
CKS1BP61024 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
CKS1BP61024 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC11.96□□□□□ -0.49
CKS1BP61024 AC104390.1-201ENST00000555663 520 ntBASIC11.96□□□□□ -0.49
CKS1BP61024 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC11.96□□□□□ -0.49
CKS1BP61024 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms