Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.3□□□□□ -0.28
RAB5BP61020 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RAB5BP61020 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RAB5BP61020 AC006486.2-201ENST00000624246 2199 ntBASIC13.3□□□□□ -0.28
RAB5BP61020 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
RAB5BP61020 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
RAB5BP61020 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RAB5BP61020 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
RAB5BP61020 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
RAB5BP61020 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
RAB5BP61020 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
RAB5BP61020 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB5BP61020 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RAB5BP61020 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
RAB5BP61020 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB5BP61020 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB5BP61020 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB5BP61020 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB5BP61020 AP000593.1-201ENST00000393668 712 ntBASIC13.29□□□□□ -0.28
RAB5BP61020 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.29□□□□□ -0.28
RAB5BP61020 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB5BP61020 RARRES2P4-201ENST00000514074 484 ntBASIC13.29□□□□□ -0.28
RAB5BP61020 AL589743.5-201ENST00000616611 1050 ntBASIC13.29□□□□□ -0.28
RAB5BP61020 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
RAB5BP61020 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB5BP61020 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB5BP61020 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
RAB5BP61020 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 AC008406.3-201ENST00000620001 1374 ntBASIC13.29□□□□□ -0.28
RAB5BP61020 LINC02228-203ENST00000641970 1355 ntBASIC13.29□□□□□ -0.28
RAB5BP61020 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.29□□□□□ -0.28
RAB5BP61020 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RAB5BP61020 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
RAB5BP61020 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.29□□□□□ -0.28
RAB5BP61020 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RAB5BP61020 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB5BP61020 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5BP61020 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5BP61020 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5BP61020 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5BP61020 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5BP61020 AC010491.1-201ENST00000563101 2797 ntBASIC13.28□□□□□ -0.28
RAB5BP61020 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB5BP61020 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RAB5BP61020 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5BP61020 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5BP61020 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RAB5BP61020 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RAB5BP61020 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RAB5BP61020 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB5BP61020 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
RAB5BP61020 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RAB5BP61020 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5BP61020 AC007322.4-201ENST00000509611 723 ntBASIC13.28□□□□□ -0.28
RAB5BP61020 AP001330.3-201ENST00000520123 633 ntBASIC13.28□□□□□ -0.28
RAB5BP61020 CYP2T3P-201ENST00000601990 817 ntBASIC13.28□□□□□ -0.28
RAB5BP61020 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB5BP61020 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5BP61020 AC092053.1-201ENST00000605787 1936 ntBASIC13.28□□□□□ -0.28
RAB5BP61020 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5BP61020 NXN-202ENST00000537628 1340 ntTSL 3 BASIC13.28□□□□□ -0.28
RAB5BP61020 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RAB5BP61020 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5BP61020 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
RAB5BP61020 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.28□□□□□ -0.28
RAB5BP61020 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5BP61020 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5BP61020 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5BP61020 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5BP61020 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5BP61020 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.28□□□□□ -0.28
RAB5BP61020 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
RAB5BP61020 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RAB5BP61020 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms