Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MCCD1P59942 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MCCD1P59942 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MCCD1P59942 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC18.07■□□□□ 0.48
MCCD1P59942 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MCCD1P59942 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MCCD1P59942 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.07■□□□□ 0.48
MCCD1P59942 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
MCCD1P59942 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.07■□□□□ 0.48
MCCD1P59942 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
MCCD1P59942 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
MCCD1P59942 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
MCCD1P59942 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MCCD1P59942 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
MCCD1P59942 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
MCCD1P59942 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.07■□□□□ 0.48
MCCD1P59942 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.07■□□□□ 0.48
MCCD1P59942 PIN1-206ENST00000587625 878 ntTSL 2 BASIC18.07■□□□□ 0.48
MCCD1P59942 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.07■□□□□ 0.48
MCCD1P59942 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.07■□□□□ 0.48
MCCD1P59942 FAM197Y3-203ENST00000618346 717 ntBASIC18.07■□□□□ 0.48
MCCD1P59942 AC007064.4-201ENST00000637740 555 ntBASIC18.07■□□□□ 0.48
MCCD1P59942 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.07■□□□□ 0.48
MCCD1P59942 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
MCCD1P59942 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MCCD1P59942 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MCCD1P59942 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MCCD1P59942 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MCCD1P59942 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
MCCD1P59942 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
MCCD1P59942 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
MCCD1P59942 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
MCCD1P59942 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
MCCD1P59942 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
MCCD1P59942 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MCCD1P59942 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.06■□□□□ 0.48
MCCD1P59942 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
MCCD1P59942 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
MCCD1P59942 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MCCD1P59942 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
MCCD1P59942 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC18.06■□□□□ 0.48
MCCD1P59942 AC140658.5-201ENST00000438532 169 ntBASIC18.06■□□□□ 0.48
MCCD1P59942 AL591424.1-201ENST00000442569 1213 ntBASIC18.06■□□□□ 0.48
MCCD1P59942 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.06■□□□□ 0.48
MCCD1P59942 AL513480.1-201ENST00000451731 511 ntBASIC18.06■□□□□ 0.48
MCCD1P59942 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.06■□□□□ 0.48
MCCD1P59942 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
MCCD1P59942 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.06■□□□□ 0.48
MCCD1P59942 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.06■□□□□ 0.48
MCCD1P59942 AC023141.13-201ENST00000604991 943 ntBASIC18.06■□□□□ 0.48
MCCD1P59942 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC18.06■□□□□ 0.48
MCCD1P59942 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.06■□□□□ 0.48
MCCD1P59942 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
MCCD1P59942 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MCCD1P59942 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.06■□□□□ 0.48
MCCD1P59942 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
MCCD1P59942 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
MCCD1P59942 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MCCD1P59942 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
MCCD1P59942 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.06■□□□□ 0.48
MCCD1P59942 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.06■□□□□ 0.48
MCCD1P59942 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
MCCD1P59942 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MCCD1P59942 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MCCD1P59942 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
MCCD1P59942 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MCCD1P59942 AC124067.4-201ENST00000519691 2379 ntBASIC18.05■□□□□ 0.48
MCCD1P59942 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.05■□□□□ 0.48
MCCD1P59942 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MCCD1P59942 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.05■□□□□ 0.48
MCCD1P59942 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
MCCD1P59942 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
MCCD1P59942 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MCCD1P59942 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
MCCD1P59942 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MCCD1P59942 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.05■□□□□ 0.48
MCCD1P59942 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.05■□□□□ 0.48
MCCD1P59942 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
MCCD1P59942 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
MCCD1P59942 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
MCCD1P59942 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
MCCD1P59942 KRT19P2-202ENST00000557173 1012 ntBASIC18.05■□□□□ 0.48
MCCD1P59942 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
MCCD1P59942 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.05■□□□□ 0.48
MCCD1P59942 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.05■□□□□ 0.48
MCCD1P59942 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.05■□□□□ 0.48
MCCD1P59942 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MCCD1P59942 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
MCCD1P59942 CA12-203ENST00000422263 2556 ntTSL 2 BASIC18.05■□□□□ 0.48
MCCD1P59942 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
MCCD1P59942 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
MCCD1P59942 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MCCD1P59942 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
MCCD1P59942 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
MCCD1P59942 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MCCD1P59942 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
MCCD1P59942 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MCCD1P59942 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
MCCD1P59942 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
MCCD1P59942 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms