Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN20P56880 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN20P56880 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN20P56880 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN20P56880 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN20P56880 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN20P56880 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.62■□□□□ 0.09
CLDN20P56880 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDN20P56880 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN20P56880 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN20P56880 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN20P56880 NCF1C-201ENST00000438382 1427 ntBASIC15.61■□□□□ 0.09
CLDN20P56880 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CLDN20P56880 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN20P56880 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN20P56880 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN20P56880 AP002414.3-201ENST00000589352 1468 ntBASIC15.61■□□□□ 0.09
CLDN20P56880 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN20P56880 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CLDN20P56880 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN20P56880 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
CLDN20P56880 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN20P56880 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDN20P56880 AL590627.1-203ENST00000421194 1026 ntBASIC15.61■□□□□ 0.09
CLDN20P56880 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDN20P56880 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.61■□□□□ 0.09
CLDN20P56880 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDN20P56880 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CLDN20P56880 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN20P56880 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDN20P56880 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN20P56880 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CLDN20P56880 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.61■□□□□ 0.09
CLDN20P56880 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN20P56880 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN20P56880 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CLDN20P56880 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLDN20P56880 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDN20P56880 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
CLDN20P56880 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
CLDN20P56880 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN20P56880 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN20P56880 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CLDN20P56880 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CLDN20P56880 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN20P56880 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN20P56880 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN20P56880 AC092910.1-201ENST00000482027 1129 ntBASIC15.6■□□□□ 0.09
CLDN20P56880 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN20P56880 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.6■□□□□ 0.09
CLDN20P56880 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.6■□□□□ 0.09
CLDN20P56880 AC105339.3-201ENST00000560043 636 ntBASIC15.6■□□□□ 0.09
CLDN20P56880 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN20P56880 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.6■□□□□ 0.09
CLDN20P56880 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN20P56880 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.6■□□□□ 0.09
CLDN20P56880 AC006557.2-201ENST00000592985 1240 ntBASIC15.6■□□□□ 0.09
CLDN20P56880 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.6■□□□□ 0.09
CLDN20P56880 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.6■□□□□ 0.09
CLDN20P56880 AC120114.3-201ENST00000611923 658 ntBASIC15.6■□□□□ 0.09
CLDN20P56880 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC15.6■□□□□ 0.09
CLDN20P56880 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.6■□□□□ 0.09
CLDN20P56880 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.6■□□□□ 0.09
CLDN20P56880 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 LINC02199-201ENST00000506655 2702 ntBASIC15.6■□□□□ 0.09
CLDN20P56880 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CLDN20P56880 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.6■□□□□ 0.09
CLDN20P56880 IL9RP2-201ENST00000423948 1312 ntBASIC15.6■□□□□ 0.09
CLDN20P56880 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CLDN20P56880 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CLDN20P56880 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CLDN20P56880 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CLDN20P56880 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CLDN20P56880 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDN20P56880 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN20P56880 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLDN20P56880 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.59■□□□□ 0.09
CLDN20P56880 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.59■□□□□ 0.09
CLDN20P56880 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CLDN20P56880 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CLDN20P56880 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms