Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 RNA5SP419-201ENST00000515908 135 ntBASIC17.15■□□□□ 0.34
WNT3AP56704 IGHV3-65-201ENST00000523210 341 ntBASIC17.15■□□□□ 0.34
WNT3AP56704 AP002490.2-201ENST00000524791 560 ntBASIC17.15■□□□□ 0.34
WNT3AP56704 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
WNT3AP56704 SLC25A6P4-201ENST00000586535 553 ntBASIC17.15■□□□□ 0.34
WNT3AP56704 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.15■□□□□ 0.34
WNT3AP56704 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.15■□□□□ 0.34
WNT3AP56704 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.15■□□□□ 0.34
WNT3AP56704 GGTLC5P-201ENST00000617623 998 ntBASIC17.15■□□□□ 0.34
WNT3AP56704 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.15■□□□□ 0.34
WNT3AP56704 AC005593.1-201ENST00000624894 515 ntBASIC17.15■□□□□ 0.34
WNT3AP56704 ABBA01031661.1-201ENST00000634362 1253 ntBASIC17.15■□□□□ 0.34
WNT3AP56704 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
WNT3AP56704 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
WNT3AP56704 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.15■□□□□ 0.34
WNT3AP56704 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
WNT3AP56704 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
WNT3AP56704 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
WNT3AP56704 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
WNT3AP56704 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.15■□□□□ 0.34
WNT3AP56704 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
WNT3AP56704 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
WNT3AP56704 AC084018.2-201ENST00000613093 2607 ntBASIC17.15■□□□□ 0.34
WNT3AP56704 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
WNT3AP56704 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
WNT3AP56704 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
WNT3AP56704 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.14■□□□□ 0.33
WNT3AP56704 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
WNT3AP56704 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
WNT3AP56704 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
WNT3AP56704 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
WNT3AP56704 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
WNT3AP56704 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
WNT3AP56704 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
WNT3AP56704 AC092910.1-201ENST00000482027 1129 ntBASIC17.14■□□□□ 0.33
WNT3AP56704 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.14■□□□□ 0.33
WNT3AP56704 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.14■□□□□ 0.33
WNT3AP56704 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.14■□□□□ 0.33
WNT3AP56704 REXO1L3P-201ENST00000622202 1288 ntBASIC17.14■□□□□ 0.33
WNT3AP56704 AC117500.6-201ENST00000624871 588 ntBASIC17.14■□□□□ 0.33
WNT3AP56704 PGM5P2-202ENST00000637225 1043 ntBASIC17.14■□□□□ 0.33
WNT3AP56704 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.14■□□□□ 0.33
WNT3AP56704 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
WNT3AP56704 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
WNT3AP56704 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
WNT3AP56704 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
WNT3AP56704 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
WNT3AP56704 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
WNT3AP56704 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
WNT3AP56704 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
WNT3AP56704 TOP3BP1-201ENST00000420768 1380 ntBASIC17.14■□□□□ 0.33
WNT3AP56704 AL391256.1-201ENST00000443260 1855 ntBASIC17.14■□□□□ 0.33
WNT3AP56704 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
WNT3AP56704 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.14■□□□□ 0.33
WNT3AP56704 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
WNT3AP56704 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
WNT3AP56704 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
WNT3AP56704 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.13■□□□□ 0.33
WNT3AP56704 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
WNT3AP56704 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
WNT3AP56704 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
WNT3AP56704 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
WNT3AP56704 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
WNT3AP56704 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
WNT3AP56704 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.13■□□□□ 0.33
WNT3AP56704 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC17.13■□□□□ 0.33
WNT3AP56704 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.13■□□□□ 0.33
WNT3AP56704 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC17.13■□□□□ 0.33
WNT3AP56704 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.13■□□□□ 0.33
WNT3AP56704 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.13■□□□□ 0.33
WNT3AP56704 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.13■□□□□ 0.33
WNT3AP56704 AL662844.1-201ENST00000546340 181 ntBASIC17.13■□□□□ 0.33
WNT3AP56704 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.13■□□□□ 0.33
WNT3AP56704 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
WNT3AP56704 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.13■□□□□ 0.33
WNT3AP56704 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
WNT3AP56704 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
WNT3AP56704 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
WNT3AP56704 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.13■□□□□ 0.33
WNT3AP56704 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
WNT3AP56704 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms