Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.3■□□□□ 0.2
EPHA4P54764 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.3■□□□□ 0.2
EPHA4P54764 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.3■□□□□ 0.2
EPHA4P54764 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.3■□□□□ 0.2
EPHA4P54764 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
EPHA4P54764 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.3■□□□□ 0.2
EPHA4P54764 AC124947.2-201ENST00000547118 1133 ntBASIC16.3■□□□□ 0.2
EPHA4P54764 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.3■□□□□ 0.2
EPHA4P54764 RARRES2P8-201ENST00000566335 367 ntBASIC16.3■□□□□ 0.2
EPHA4P54764 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.3■□□□□ 0.2
EPHA4P54764 AL009183.1-201ENST00000603760 355 ntBASIC16.3■□□□□ 0.2
EPHA4P54764 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA4P54764 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.3■□□□□ 0.2
EPHA4P54764 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
EPHA4P54764 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA4P54764 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA4P54764 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA4P54764 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.3■□□□□ 0.2
EPHA4P54764 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.3■□□□□ 0.2
EPHA4P54764 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA4P54764 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.3■□□□□ 0.2
EPHA4P54764 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
EPHA4P54764 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.29■□□□□ 0.2
EPHA4P54764 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.29■□□□□ 0.2
EPHA4P54764 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA4P54764 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA4P54764 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA4P54764 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA4P54764 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA4P54764 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
EPHA4P54764 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA4P54764 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA4P54764 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA4P54764 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
EPHA4P54764 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA4P54764 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.29■□□□□ 0.2
EPHA4P54764 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
EPHA4P54764 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA4P54764 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA4P54764 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA4P54764 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA4P54764 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.29■□□□□ 0.2
EPHA4P54764 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.29■□□□□ 0.2
EPHA4P54764 TSEN15P1-201ENST00000423257 515 ntBASIC16.29■□□□□ 0.2
EPHA4P54764 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA4P54764 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.29■□□□□ 0.2
EPHA4P54764 SPDYE11-202ENST00000450699 704 ntBASIC16.29■□□□□ 0.2
EPHA4P54764 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.29■□□□□ 0.2
EPHA4P54764 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.29■□□□□ 0.2
EPHA4P54764 SPDYE9P-201ENST00000570642 692 ntBASIC16.29■□□□□ 0.2
EPHA4P54764 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA4P54764 AC027796.2-201ENST00000575326 344 ntBASIC16.29■□□□□ 0.2
EPHA4P54764 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.29■□□□□ 0.2
EPHA4P54764 SPDYE10P-202ENST00000612005 668 ntBASIC16.29■□□□□ 0.2
EPHA4P54764 SPDYE8P-202ENST00000612377 668 ntBASIC16.29■□□□□ 0.2
EPHA4P54764 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.29■□□□□ 0.2
EPHA4P54764 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA4P54764 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA4P54764 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
EPHA4P54764 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA4P54764 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
EPHA4P54764 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
EPHA4P54764 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.29■□□□□ 0.2
EPHA4P54764 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA4P54764 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
EPHA4P54764 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA4P54764 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
EPHA4P54764 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA4P54764 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA4P54764 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.28■□□□□ 0.2
EPHA4P54764 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA4P54764 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.28■□□□□ 0.2
EPHA4P54764 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA4P54764 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA4P54764 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA4P54764 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA4P54764 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
EPHA4P54764 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA4P54764 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA4P54764 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA4P54764 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
EPHA4P54764 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA4P54764 TIMM8BP1-201ENST00000452384 211 ntBASIC16.28■□□□□ 0.2
EPHA4P54764 AC023141.5-201ENST00000458585 616 ntBASIC16.28■□□□□ 0.2
EPHA4P54764 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.28■□□□□ 0.2
EPHA4P54764 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.28■□□□□ 0.2
EPHA4P54764 MPDU1-223ENST00000582151 728 ntBASIC16.28■□□□□ 0.2
EPHA4P54764 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.28■□□□□ 0.2
EPHA4P54764 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA4P54764 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA4P54764 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.28■□□□□ 0.2
EPHA4P54764 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.28■□□□□ 0.2
EPHA4P54764 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA4P54764 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA4P54764 AC124067.4-201ENST00000519691 2379 ntBASIC16.28■□□□□ 0.2
EPHA4P54764 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.28■□□□□ 0.2
EPHA4P54764 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA4P54764 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
EPHA4P54764 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.28■□□□□ 0.2
EPHA4P54764 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms