Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AC073592.4-201ENST00000623827 446 ntBASIC17.41■□□□□ 0.38
ATXN3P54252 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.41■□□□□ 0.38
ATXN3P54252 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.41■□□□□ 0.38
ATXN3P54252 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATXN3P54252 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ATXN3P54252 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATXN3P54252 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATXN3P54252 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.41■□□□□ 0.38
ATXN3P54252 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ATXN3P54252 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATXN3P54252 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ATXN3P54252 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATXN3P54252 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATXN3P54252 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATXN3P54252 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATXN3P54252 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATXN3P54252 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
ATXN3P54252 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATXN3P54252 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
ATXN3P54252 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATXN3P54252 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATXN3P54252 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATXN3P54252 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATXN3P54252 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATXN3P54252 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.4■□□□□ 0.38
ATXN3P54252 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.4■□□□□ 0.38
ATXN3P54252 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.4■□□□□ 0.38
ATXN3P54252 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.4■□□□□ 0.38
ATXN3P54252 AC103564.2-201ENST00000432853 1299 ntBASIC17.4■□□□□ 0.38
ATXN3P54252 CEND1P1-201ENST00000451006 455 ntBASIC17.4■□□□□ 0.38
ATXN3P54252 AC122714.2-201ENST00000502787 707 ntBASIC17.4■□□□□ 0.38
ATXN3P54252 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.4■□□□□ 0.38
ATXN3P54252 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
ATXN3P54252 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATXN3P54252 AC106028.4-201ENST00000614509 607 ntBASIC17.4■□□□□ 0.38
ATXN3P54252 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATXN3P54252 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.4■□□□□ 0.38
ATXN3P54252 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.4■□□□□ 0.38
ATXN3P54252 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.4■□□□□ 0.38
ATXN3P54252 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.4■□□□□ 0.38
ATXN3P54252 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
ATXN3P54252 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATXN3P54252 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
ATXN3P54252 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
ATXN3P54252 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
ATXN3P54252 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
ATXN3P54252 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
ATXN3P54252 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.39■□□□□ 0.38
ATXN3P54252 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
ATXN3P54252 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
ATXN3P54252 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.39■□□□□ 0.38
ATXN3P54252 SIGLEC16-201ENST00000599858 1437 ntBASIC17.39■□□□□ 0.38
ATXN3P54252 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.39■□□□□ 0.37
ATXN3P54252 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
ATXN3P54252 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATXN3P54252 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.39■□□□□ 0.37
ATXN3P54252 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC17.39■□□□□ 0.37
ATXN3P54252 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATXN3P54252 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATXN3P54252 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.39■□□□□ 0.37
ATXN3P54252 FAM8A3P-201ENST00000427218 844 ntBASIC17.39■□□□□ 0.37
ATXN3P54252 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
ATXN3P54252 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.39■□□□□ 0.37
ATXN3P54252 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.39■□□□□ 0.37
ATXN3P54252 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.39■□□□□ 0.37
ATXN3P54252 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.39■□□□□ 0.37
ATXN3P54252 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.39■□□□□ 0.37
ATXN3P54252 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.39■□□□□ 0.37
ATXN3P54252 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.39■□□□□ 0.37
ATXN3P54252 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.39■□□□□ 0.37
ATXN3P54252 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATXN3P54252 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATXN3P54252 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.39■□□□□ 0.37
ATXN3P54252 GMCL1P1-201ENST00000463439 1581 ntBASIC17.39■□□□□ 0.37
ATXN3P54252 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATXN3P54252 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATXN3P54252 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATXN3P54252 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATXN3P54252 AL023806.1-201ENST00000603994 1649 ntBASIC17.39■□□□□ 0.37
ATXN3P54252 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.39■□□□□ 0.37
ATXN3P54252 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATXN3P54252 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
ATXN3P54252 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
ATXN3P54252 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
ATXN3P54252 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATXN3P54252 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ATXN3P54252 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATXN3P54252 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
ATXN3P54252 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.38■□□□□ 0.37
ATXN3P54252 AL139384.1-201ENST00000612143 3047 ntBASIC17.38■□□□□ 0.37
ATXN3P54252 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ATXN3P54252 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
ATXN3P54252 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
ATXN3P54252 SPDYE21P-201ENST00000413323 827 ntBASIC17.38■□□□□ 0.37
ATXN3P54252 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.38■□□□□ 0.37
ATXN3P54252 MKNK2P1-201ENST00000437526 628 ntBASIC17.38■□□□□ 0.37
ATXN3P54252 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
ATXN3P54252 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.38■□□□□ 0.37
ATXN3P54252 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
ATXN3P54252 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms