Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HMGA2P52926 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGA2P52926 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
HMGA2P52926 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HMGA2P52926 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC15.5■□□□□ 0.07
HMGA2P52926 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 AC233702.3-201ENST00000578656 1387 ntBASIC15.49■□□□□ 0.07
HMGA2P52926 AC016734.2-201ENST00000624325 1377 ntBASIC15.49■□□□□ 0.07
HMGA2P52926 AC002310.6-201ENST00000624451 1377 ntBASIC15.49■□□□□ 0.07
HMGA2P52926 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGA2P52926 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.49■□□□□ 0.07
HMGA2P52926 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.49■□□□□ 0.07
HMGA2P52926 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGA2P52926 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGA2P52926 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC15.49■□□□□ 0.07
HMGA2P52926 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGA2P52926 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 RCN1P2-201ENST00000398357 915 ntBASIC15.49■□□□□ 0.07
HMGA2P52926 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.49■□□□□ 0.07
HMGA2P52926 BX276092.5-203ENST00000456199 560 ntBASIC15.49■□□□□ 0.07
HMGA2P52926 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
HMGA2P52926 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.49■□□□□ 0.07
HMGA2P52926 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.49■□□□□ 0.07
HMGA2P52926 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.49■□□□□ 0.07
HMGA2P52926 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
HMGA2P52926 AC066615.1-201ENST00000640911 628 ntBASIC15.49■□□□□ 0.07
HMGA2P52926 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
HMGA2P52926 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.49■□□□□ 0.07
HMGA2P52926 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGA2P52926 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.49■□□□□ 0.07
HMGA2P52926 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.49■□□□□ 0.07
HMGA2P52926 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.49■□□□□ 0.07
HMGA2P52926 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HMGA2P52926 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.49■□□□□ 0.07
HMGA2P52926 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
HMGA2P52926 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HMGA2P52926 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGA2P52926 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
HMGA2P52926 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HMGA2P52926 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGA2P52926 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGA2P52926 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
HMGA2P52926 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGA2P52926 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 PKD1P1-201ENST00000458669 6805 ntBASIC15.48■□□□□ 0.07
HMGA2P52926 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.48■□□□□ 0.07
HMGA2P52926 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
HMGA2P52926 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.48■□□□□ 0.07
HMGA2P52926 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HMGA2P52926 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HMGA2P52926 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGA2P52926 BNIP3P18-201ENST00000593976 575 ntBASIC15.48■□□□□ 0.07
HMGA2P52926 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGA2P52926 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC15.48■□□□□ 0.07
HMGA2P52926 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.48■□□□□ 0.07
HMGA2P52926 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
HMGA2P52926 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 SNX33P1-201ENST00000592116 1762 ntBASIC15.48■□□□□ 0.07
HMGA2P52926 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.48■□□□□ 0.07
HMGA2P52926 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGA2P52926 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
HMGA2P52926 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.48■□□□□ 0.07
HMGA2P52926 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
HMGA2P52926 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms