Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
GPC3P51654 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GPC3P51654 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GPC3P51654 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC3P51654 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC3P51654 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GPC3P51654 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.69■□□□□ 0.58
GPC3P51654 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.69■□□□□ 0.58
GPC3P51654 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.69■□□□□ 0.58
GPC3P51654 MIR4515-201ENST00000584082 81 ntBASIC18.69■□□□□ 0.58
GPC3P51654 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
GPC3P51654 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
GPC3P51654 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.69■□□□□ 0.58
GPC3P51654 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.69■□□□□ 0.58
GPC3P51654 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
GPC3P51654 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.69■□□□□ 0.58
GPC3P51654 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC3P51654 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
GPC3P51654 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC3P51654 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC3P51654 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC3P51654 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.69■□□□□ 0.58
GPC3P51654 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
GPC3P51654 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.69■□□□□ 0.58
GPC3P51654 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.69■□□□□ 0.58
GPC3P51654 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
GPC3P51654 LINC02012-201ENST00000608206 1725 ntBASIC18.69■□□□□ 0.58
GPC3P51654 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
GPC3P51654 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC3P51654 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GPC3P51654 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC3P51654 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GPC3P51654 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GPC3P51654 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC3P51654 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC3P51654 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GPC3P51654 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GPC3P51654 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.68■□□□□ 0.58
GPC3P51654 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.68■□□□□ 0.58
GPC3P51654 AC112191.1-201ENST00000523689 701 ntBASIC18.68■□□□□ 0.58
GPC3P51654 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.68■□□□□ 0.58
GPC3P51654 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.68■□□□□ 0.58
GPC3P51654 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC3P51654 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
GPC3P51654 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GPC3P51654 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.68■□□□□ 0.58
GPC3P51654 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
GPC3P51654 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
GPC3P51654 KRT18P28-201ENST00000453838 1332 ntBASIC18.68■□□□□ 0.58
GPC3P51654 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC3P51654 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
GPC3P51654 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.68■□□□□ 0.58
GPC3P51654 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC3P51654 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GPC3P51654 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GPC3P51654 AC080080.1-201ENST00000625121 2420 ntBASIC18.68■□□□□ 0.58
GPC3P51654 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC3P51654 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GPC3P51654 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC3P51654 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GPC3P51654 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GPC3P51654 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
GPC3P51654 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GPC3P51654 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC3P51654 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.67■□□□□ 0.58
GPC3P51654 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC3P51654 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC3P51654 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.67■□□□□ 0.58
GPC3P51654 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.67■□□□□ 0.58
GPC3P51654 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GPC3P51654 AC140658.5-201ENST00000438532 169 ntBASIC18.67■□□□□ 0.58
GPC3P51654 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.67■□□□□ 0.58
GPC3P51654 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC3P51654 AC005412.3-201ENST00000580309 715 ntBASIC18.67■□□□□ 0.58
GPC3P51654 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC3P51654 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.67■□□□□ 0.58
GPC3P51654 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC3P51654 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC3P51654 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC3P51654 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC3P51654 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC3P51654 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
GPC3P51654 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.67■□□□□ 0.58
GPC3P51654 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GPC3P51654 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC3P51654 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GPC3P51654 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.67■□□□□ 0.58
GPC3P51654 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC3P51654 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
GPC3P51654 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GPC3P51654 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC3P51654 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC3P51654 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
GPC3P51654 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC18.66■□□□□ 0.58
GPC3P51654 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.66■□□□□ 0.58
GPC3P51654 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GPC3P51654 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
GPC3P51654 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
GPC3P51654 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GPC3P51654 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms