Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRIM2P49643 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRIM2P49643 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PRIM2P49643 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PRIM2P49643 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRIM2P49643 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PRIM2P49643 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.21■□□□□ 0.19
PRIM2P49643 AC092068.3-201ENST00000587894 2016 ntBASIC16.21■□□□□ 0.19
PRIM2P49643 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.21■□□□□ 0.19
PRIM2P49643 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRIM2P49643 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.21■□□□□ 0.19
PRIM2P49643 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PRIM2P49643 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
PRIM2P49643 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRIM2P49643 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
PRIM2P49643 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRIM2P49643 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.21■□□□□ 0.19
PRIM2P49643 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.21■□□□□ 0.19
PRIM2P49643 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.21■□□□□ 0.19
PRIM2P49643 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRIM2P49643 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRIM2P49643 AC124947.2-201ENST00000547118 1133 ntBASIC16.21■□□□□ 0.19
PRIM2P49643 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.21■□□□□ 0.19
PRIM2P49643 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRIM2P49643 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PRIM2P49643 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.21■□□□□ 0.19
PRIM2P49643 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRIM2P49643 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRIM2P49643 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PRIM2P49643 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRIM2P49643 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PRIM2P49643 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
PRIM2P49643 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PRIM2P49643 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
PRIM2P49643 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.2■□□□□ 0.18
PRIM2P49643 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PRIM2P49643 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRIM2P49643 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
PRIM2P49643 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRIM2P49643 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.2■□□□□ 0.18
PRIM2P49643 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRIM2P49643 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
PRIM2P49643 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PRIM2P49643 AC132938.5-201ENST00000624980 1813 ntBASIC16.2■□□□□ 0.18
PRIM2P49643 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PRIM2P49643 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.2■□□□□ 0.18
PRIM2P49643 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRIM2P49643 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.2■□□□□ 0.18
PRIM2P49643 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.2■□□□□ 0.18
PRIM2P49643 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.2■□□□□ 0.18
PRIM2P49643 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
PRIM2P49643 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRIM2P49643 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.2■□□□□ 0.18
PRIM2P49643 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.2■□□□□ 0.18
PRIM2P49643 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRIM2P49643 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.2■□□□□ 0.18
PRIM2P49643 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.2■□□□□ 0.18
PRIM2P49643 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PRIM2P49643 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.2■□□□□ 0.18
PRIM2P49643 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRIM2P49643 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRIM2P49643 AC079328.2-201ENST00000561241 3354 ntBASIC16.2■□□□□ 0.18
PRIM2P49643 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PRIM2P49643 AC063926.3-201ENST00000624734 5658 ntBASIC16.2■□□□□ 0.18
PRIM2P49643 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRIM2P49643 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRIM2P49643 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRIM2P49643 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.2■□□□□ 0.18
PRIM2P49643 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRIM2P49643 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PRIM2P49643 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.2■□□□□ 0.18
PRIM2P49643 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PRIM2P49643 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
PRIM2P49643 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PRIM2P49643 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PRIM2P49643 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
PRIM2P49643 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
PRIM2P49643 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.19■□□□□ 0.18
PRIM2P49643 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.19■□□□□ 0.18
PRIM2P49643 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
PRIM2P49643 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 EGFEM1P-202ENST00000431685 1563 ntBASIC16.19■□□□□ 0.18
PRIM2P49643 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PRIM2P49643 NUS1P2-201ENST00000417358 873 ntBASIC16.19■□□□□ 0.18
PRIM2P49643 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms