Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AC006504.4-201ENST00000592118 1568 ntBASIC15.13■□□□□ 0.01
CSNK1A1P48729 TERC-201ENST00000602385 541 ntBASIC15.13■□□□□ 0.01
CSNK1A1P48729 AL031008.1-201ENST00000619963 541 ntBASIC15.13■□□□□ 0.01
CSNK1A1P48729 MIR1199-201ENST00000621445 119 ntBASIC15.13■□□□□ 0.01
CSNK1A1P48729 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC15.13■□□□□ 0.01
CSNK1A1P48729 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC15.13■□□□□ 0.01
CSNK1A1P48729 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CSNK1A1P48729 AC105020.1-201ENST00000435356 2205 ntBASIC15.13■□□□□ 0.01
CSNK1A1P48729 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.13■□□□□ 0.01
CSNK1A1P48729 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CSNK1A1P48729 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CSNK1A1P48729 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.13■□□□□ 0.01
CSNK1A1P48729 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC15.13■□□□□ 0.01
CSNK1A1P48729 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1A1P48729 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.12■□□□□ 0.01
CSNK1A1P48729 AL021920.2-201ENST00000624828 1351 ntBASIC15.12■□□□□ 0.01
CSNK1A1P48729 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CSNK1A1P48729 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.12■□□□□ 0.01
CSNK1A1P48729 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CSNK1A1P48729 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.12■□□□□ 0.01
CSNK1A1P48729 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.12■□□□□ 0.01
CSNK1A1P48729 MED22-202ENST00000371999 987 ntTSL 3 BASIC15.12■□□□□ 0.01
CSNK1A1P48729 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.12■□□□□ 0.01
CSNK1A1P48729 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.12■□□□□ 0.01
CSNK1A1P48729 AC018712.1-201ENST00000455767 687 ntBASIC15.12■□□□□ 0.01
CSNK1A1P48729 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.12■□□□□ 0.01
CSNK1A1P48729 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.12■□□□□ 0.01
CSNK1A1P48729 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.12■□□□□ 0.01
CSNK1A1P48729 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.12■□□□□ 0.01
CSNK1A1P48729 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.12■□□□□ 0.01
CSNK1A1P48729 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
CSNK1A1P48729 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.12■□□□□ 0.01
CSNK1A1P48729 AL805961.1-202ENST00000641562 540 ntBASIC15.12■□□□□ 0.01
CSNK1A1P48729 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.12■□□□□ 0.01
CSNK1A1P48729 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
CSNK1A1P48729 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
CSNK1A1P48729 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 PI4KAP1-204ENST00000612579 1703 ntBASIC15.12■□□□□ 0.01
CSNK1A1P48729 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CSNK1A1P48729 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1P48729 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CSNK1A1P48729 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
CSNK1A1P48729 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CSNK1A1P48729 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
CSNK1A1P48729 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1P48729 PTCHD3P3-201ENST00000403073 906 ntBASIC15.11■□□□□ 0.01
CSNK1A1P48729 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.11■□□□□ 0.01
CSNK1A1P48729 TPM4P1-201ENST00000436100 807 ntBASIC15.11■□□□□ 0.01
CSNK1A1P48729 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CSNK1A1P48729 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.11■□□□□ 0.01
CSNK1A1P48729 AC136632.2-201ENST00000512891 861 ntBASIC15.11■□□□□ 0.01
CSNK1A1P48729 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.11■□□□□ 0.01
CSNK1A1P48729 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
CSNK1A1P48729 AC008735.5-201ENST00000623544 497 ntBASIC15.11■□□□□ 0.01
CSNK1A1P48729 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.11■□□□□ 0.01
CSNK1A1P48729 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.11■□□□□ 0.01
CSNK1A1P48729 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms