Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.29■□□□□ 0.04
SOX6P35712 OR2I1P-210ENST00000642037 4691 ntBASIC15.29■□□□□ 0.04
SOX6P35712 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SOX6P35712 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SOX6P35712 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.29■□□□□ 0.04
SOX6P35712 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SOX6P35712 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 KRT8P47-201ENST00000604727 1398 ntBASIC15.29■□□□□ 0.04
SOX6P35712 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SOX6P35712 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.29■□□□□ 0.04
SOX6P35712 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.29■□□□□ 0.04
SOX6P35712 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.29■□□□□ 0.04
SOX6P35712 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.29■□□□□ 0.04
SOX6P35712 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC15.29■□□□□ 0.04
SOX6P35712 AP000692.2-201ENST00000608391 879 ntBASIC15.29■□□□□ 0.04
SOX6P35712 MIR6786-201ENST00000616843 113 ntBASIC15.29■□□□□ 0.04
SOX6P35712 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.29■□□□□ 0.04
SOX6P35712 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.29■□□□□ 0.04
SOX6P35712 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SOX6P35712 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
SOX6P35712 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SOX6P35712 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SOX6P35712 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.29■□□□□ 0.04
SOX6P35712 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SOX6P35712 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SOX6P35712 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.28■□□□□ 0.04
SOX6P35712 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC15.28■□□□□ 0.04
SOX6P35712 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.28■□□□□ 0.04
SOX6P35712 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
SOX6P35712 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.28■□□□□ 0.04
SOX6P35712 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SOX6P35712 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.28■□□□□ 0.04
SOX6P35712 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SOX6P35712 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SOX6P35712 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.28■□□□□ 0.04
SOX6P35712 MIR4785-201ENST00000585005 73 ntBASIC15.28■□□□□ 0.04
SOX6P35712 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.28■□□□□ 0.04
SOX6P35712 AC112497.1-201ENST00000624824 639 ntBASIC15.28■□□□□ 0.04
SOX6P35712 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SOX6P35712 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
SOX6P35712 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SOX6P35712 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.28■□□□□ 0.04
SOX6P35712 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.28■□□□□ 0.04
SOX6P35712 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SOX6P35712 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.27■□□□□ 0.04
SOX6P35712 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SOX6P35712 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SOX6P35712 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SOX6P35712 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SOX6P35712 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SOX6P35712 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.27■□□□□ 0.04
SOX6P35712 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SOX6P35712 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
SOX6P35712 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SOX6P35712 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SOX6P35712 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SOX6P35712 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
SOX6P35712 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SOX6P35712 KRT17P2-201ENST00000300992 1314 ntBASIC15.27■□□□□ 0.04
SOX6P35712 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms