Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
SLC6A4P31645 AC099522.2-201ENST00000607001 744 ntBASIC17.36■□□□□ 0.37
SLC6A4P31645 CITED2-204ENST00000618718 901 ntTSL 2 BASIC17.36■□□□□ 0.37
SLC6A4P31645 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC6A4P31645 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SLC6A4P31645 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A4P31645 TUBB8P12-201ENST00000308911 1335 ntBASIC17.36■□□□□ 0.37
SLC6A4P31645 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SLC6A4P31645 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC17.36■□□□□ 0.37
SLC6A4P31645 TUBB7P-202ENST00000428444 1305 ntBASIC17.36■□□□□ 0.37
SLC6A4P31645 TUBB8P7-204ENST00000567960 1332 ntBASIC17.36■□□□□ 0.37
SLC6A4P31645 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SLC6A4P31645 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A4P31645 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SLC6A4P31645 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SLC6A4P31645 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A4P31645 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A4P31645 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A4P31645 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A4P31645 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A4P31645 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SLC6A4P31645 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A4P31645 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SLC6A4P31645 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.35■□□□□ 0.37
SLC6A4P31645 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A4P31645 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SLC6A4P31645 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SLC6A4P31645 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A4P31645 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SLC6A4P31645 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A4P31645 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
SLC6A4P31645 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.35■□□□□ 0.37
SLC6A4P31645 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC6A4P31645 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC17.35■□□□□ 0.37
SLC6A4P31645 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A4P31645 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC6A4P31645 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.35■□□□□ 0.37
SLC6A4P31645 AC087641.1-201ENST00000557561 1021 ntBASIC17.35■□□□□ 0.37
SLC6A4P31645 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.35■□□□□ 0.37
SLC6A4P31645 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC6A4P31645 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC6A4P31645 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC6A4P31645 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A4P31645 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.35■□□□□ 0.37
SLC6A4P31645 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.35■□□□□ 0.37
SLC6A4P31645 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.35■□□□□ 0.37
SLC6A4P31645 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A4P31645 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A4P31645 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A4P31645 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A4P31645 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SLC6A4P31645 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A4P31645 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A4P31645 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A4P31645 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A4P31645 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A4P31645 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A4P31645 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A4P31645 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A4P31645 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A4P31645 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.34■□□□□ 0.37
SLC6A4P31645 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC6A4P31645 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.34■□□□□ 0.37
SLC6A4P31645 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC6A4P31645 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SLC6A4P31645 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A4P31645 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.34■□□□□ 0.37
SLC6A4P31645 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A4P31645 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.34■□□□□ 0.37
SLC6A4P31645 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A4P31645 DNAJB3-202ENST00000449667 1266 ntBASIC17.34■□□□□ 0.37
SLC6A4P31645 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
SLC6A4P31645 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
SLC6A4P31645 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A4P31645 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A4P31645 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SLC6A4P31645 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A4P31645 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.34■□□□□ 0.37
SLC6A4P31645 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SLC6A4P31645 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A4P31645 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SLC6A4P31645 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.34■□□□□ 0.37
SLC6A4P31645 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SLC6A4P31645 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC6A4P31645 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC6A4P31645 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SLC6A4P31645 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC6A4P31645 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC6A4P31645 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SLC6A4P31645 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC6A4P31645 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SLC6A4P31645 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SLC6A4P31645 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
SLC6A4P31645 ADH5P3-201ENST00000433842 1137 ntBASIC17.33■□□□□ 0.36
SLC6A4P31645 AP006288.1-201ENST00000446065 395 ntBASIC17.33■□□□□ 0.36
SLC6A4P31645 AC112191.1-201ENST00000523689 701 ntBASIC17.33■□□□□ 0.36
SLC6A4P31645 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
SLC6A4P31645 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SLC6A4P31645 CYP2A7P1-201ENST00000595391 815 ntBASIC17.33■□□□□ 0.36
SLC6A4P31645 AP001160.2-201ENST00000596071 487 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms