Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL928711.1-201ENST00000570165 459 ntBASIC14.33□□□□□ -0.12
COL8A2P25067 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL8A2P25067 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.33□□□□□ -0.12
COL8A2P25067 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC14.33□□□□□ -0.12
COL8A2P25067 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.33□□□□□ -0.12
COL8A2P25067 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL8A2P25067 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL8A2P25067 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
COL8A2P25067 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.33□□□□□ -0.12
COL8A2P25067 EGFEM1P-202ENST00000431685 1563 ntBASIC14.33□□□□□ -0.12
COL8A2P25067 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL8A2P25067 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
COL8A2P25067 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.33□□□□□ -0.12
COL8A2P25067 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
COL8A2P25067 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
COL8A2P25067 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
COL8A2P25067 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL8A2P25067 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
COL8A2P25067 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL8A2P25067 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL8A2P25067 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL8A2P25067 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC14.32□□□□□ -0.12
COL8A2P25067 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
COL8A2P25067 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.32□□□□□ -0.12
COL8A2P25067 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL8A2P25067 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL8A2P25067 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
COL8A2P25067 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL8A2P25067 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL8A2P25067 PKD1P1-201ENST00000458669 6805 ntBASIC14.32□□□□□ -0.12
COL8A2P25067 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
COL8A2P25067 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
COL8A2P25067 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
COL8A2P25067 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL8A2P25067 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL8A2P25067 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL8A2P25067 SLC25A1P3-201ENST00000395415 828 ntBASIC14.32□□□□□ -0.12
COL8A2P25067 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL8A2P25067 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.32□□□□□ -0.12
COL8A2P25067 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.32□□□□□ -0.12
COL8A2P25067 FAM58CP-201ENST00000435741 640 ntBASIC14.32□□□□□ -0.12
COL8A2P25067 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.32□□□□□ -0.12
COL8A2P25067 AC107918.2-201ENST00000530817 355 ntBASIC14.32□□□□□ -0.12
COL8A2P25067 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.32□□□□□ -0.12
COL8A2P25067 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.32□□□□□ -0.12
COL8A2P25067 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.32□□□□□ -0.12
COL8A2P25067 REXO1L3P-201ENST00000622202 1288 ntBASIC14.32□□□□□ -0.12
COL8A2P25067 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.32□□□□□ -0.12
COL8A2P25067 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
COL8A2P25067 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL8A2P25067 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL8A2P25067 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
COL8A2P25067 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.32□□□□□ -0.12
COL8A2P25067 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL8A2P25067 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL8A2P25067 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.32□□□□□ -0.12
COL8A2P25067 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL8A2P25067 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
COL8A2P25067 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.31□□□□□ -0.12
COL8A2P25067 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 UBALD1-205ENST00000590891 2641 ntBASIC14.31□□□□□ -0.12
COL8A2P25067 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.31□□□□□ -0.12
COL8A2P25067 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
COL8A2P25067 ELL2P1-201ENST00000413990 1906 ntBASIC14.31□□□□□ -0.12
COL8A2P25067 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
COL8A2P25067 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
COL8A2P25067 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.31□□□□□ -0.12
COL8A2P25067 NEK7-201ENST00000367383 586 ntTSL 2 BASIC14.31□□□□□ -0.12
COL8A2P25067 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.31□□□□□ -0.12
COL8A2P25067 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.31□□□□□ -0.12
COL8A2P25067 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
COL8A2P25067 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.31□□□□□ -0.12
COL8A2P25067 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.31□□□□□ -0.12
COL8A2P25067 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.31□□□□□ -0.12
COL8A2P25067 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
COL8A2P25067 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.31□□□□□ -0.12
COL8A2P25067 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.31□□□□□ -0.12
COL8A2P25067 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.31□□□□□ -0.12
COL8A2P25067 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
COL8A2P25067 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
COL8A2P25067 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.31□□□□□ -0.12
COL8A2P25067 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
COL8A2P25067 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
COL8A2P25067 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms