Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCND1P24385 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.16■□□□□ 0.34
CCND1P24385 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCND1P24385 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCND1P24385 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCND1P24385 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCND1P24385 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCND1P24385 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CCND1P24385 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCND1P24385 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCND1P24385 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCND1P24385 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCND1P24385 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.15■□□□□ 0.34
CCND1P24385 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCND1P24385 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCND1P24385 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.15■□□□□ 0.34
CCND1P24385 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCND1P24385 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCND1P24385 COX5BP2-201ENST00000392354 334 ntBASIC17.15■□□□□ 0.34
CCND1P24385 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCND1P24385 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCND1P24385 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.15■□□□□ 0.34
CCND1P24385 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.15■□□□□ 0.34
CCND1P24385 AC005336.2-201ENST00000593183 939 ntBASIC17.15■□□□□ 0.34
CCND1P24385 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.15■□□□□ 0.34
CCND1P24385 NPAP1P7-201ENST00000613027 823 ntBASIC17.15■□□□□ 0.34
CCND1P24385 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.15■□□□□ 0.34
CCND1P24385 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCND1P24385 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CCND1P24385 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCND1P24385 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCND1P24385 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCND1P24385 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.15■□□□□ 0.34
CCND1P24385 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.15■□□□□ 0.34
CCND1P24385 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.15■□□□□ 0.34
CCND1P24385 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CCND1P24385 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCND1P24385 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.15■□□□□ 0.34
CCND1P24385 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CCND1P24385 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCND1P24385 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCND1P24385 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCND1P24385 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
CCND1P24385 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCND1P24385 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCND1P24385 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCND1P24385 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCND1P24385 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCND1P24385 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCND1P24385 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
CCND1P24385 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.14■□□□□ 0.33
CCND1P24385 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CCND1P24385 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCND1P24385 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CCND1P24385 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCND1P24385 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCND1P24385 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCND1P24385 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.14■□□□□ 0.33
CCND1P24385 AC005104.2-201ENST00000427818 678 ntBASIC17.14■□□□□ 0.33
CCND1P24385 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCND1P24385 TOB2P1-201ENST00000469761 992 ntBASIC17.14■□□□□ 0.33
CCND1P24385 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCND1P24385 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCND1P24385 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.14■□□□□ 0.33
CCND1P24385 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.14■□□□□ 0.33
CCND1P24385 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
CCND1P24385 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.14■□□□□ 0.33
CCND1P24385 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.14■□□□□ 0.33
CCND1P24385 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCND1P24385 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCND1P24385 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCND1P24385 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CCND1P24385 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
CCND1P24385 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
CCND1P24385 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCND1P24385 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCND1P24385 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCND1P24385 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.14■□□□□ 0.33
CCND1P24385 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCND1P24385 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCND1P24385 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCND1P24385 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCND1P24385 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCND1P24385 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCND1P24385 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCND1P24385 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.13■□□□□ 0.33
CCND1P24385 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.13■□□□□ 0.33
CCND1P24385 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCND1P24385 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCND1P24385 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCND1P24385 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCND1P24385 FAM220CP-201ENST00000395253 831 ntBASIC17.13■□□□□ 0.33
CCND1P24385 AC007967.3-201ENST00000434308 558 ntBASIC17.13■□□□□ 0.33
CCND1P24385 LINC00265-3P-201ENST00000447588 903 ntBASIC17.13■□□□□ 0.33
CCND1P24385 KRT17P6-201ENST00000453795 1220 ntBASIC17.13■□□□□ 0.33
CCND1P24385 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CCND1P24385 AC122714.2-201ENST00000502787 707 ntBASIC17.13■□□□□ 0.33
CCND1P24385 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.13■□□□□ 0.33
CCND1P24385 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.13■□□□□ 0.33
CCND1P24385 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms