Protein–RNA interactions for Protein: P23942

PRPH2, Peripherin-2, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPH2P23942 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRPH2P23942 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRPH2P23942 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.13■□□□□ 0.17
PRPH2P23942 MIR1224-201ENST00000408193 85 ntBASIC16.13■□□□□ 0.17
PRPH2P23942 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.13■□□□□ 0.17
PRPH2P23942 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.13■□□□□ 0.17
PRPH2P23942 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.13■□□□□ 0.17
PRPH2P23942 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRPH2P23942 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRPH2P23942 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.13■□□□□ 0.17
PRPH2P23942 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.13■□□□□ 0.17
PRPH2P23942 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRPH2P23942 AC091167.2-201ENST00000579581 588 ntBASIC16.13■□□□□ 0.17
PRPH2P23942 AL805961.1-202ENST00000641562 540 ntBASIC16.13■□□□□ 0.17
PRPH2P23942 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
PRPH2P23942 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.13■□□□□ 0.17
PRPH2P23942 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.13■□□□□ 0.17
PRPH2P23942 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.13■□□□□ 0.17
PRPH2P23942 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRPH2P23942 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
PRPH2P23942 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRPH2P23942 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.13■□□□□ 0.17
PRPH2P23942 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRPH2P23942 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRPH2P23942 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
PRPH2P23942 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
PRPH2P23942 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.12■□□□□ 0.17
PRPH2P23942 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.12■□□□□ 0.17
PRPH2P23942 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.12■□□□□ 0.17
PRPH2P23942 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
PRPH2P23942 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
PRPH2P23942 GGT3P-204ENST00000453783 1664 ntBASIC16.12■□□□□ 0.17
PRPH2P23942 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.12■□□□□ 0.17
PRPH2P23942 AKR1C7P-201ENST00000305623 895 ntBASIC16.12■□□□□ 0.17
PRPH2P23942 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.12■□□□□ 0.17
PRPH2P23942 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 PTCHD3P3-201ENST00000403073 906 ntBASIC16.12■□□□□ 0.17
PRPH2P23942 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.12■□□□□ 0.17
PRPH2P23942 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC16.12■□□□□ 0.17
PRPH2P23942 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.12■□□□□ 0.17
PRPH2P23942 AC091304.2-201ENST00000564639 760 ntBASIC16.12■□□□□ 0.17
PRPH2P23942 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.12■□□□□ 0.17
PRPH2P23942 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.12■□□□□ 0.17
PRPH2P23942 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC16.12■□□□□ 0.17
PRPH2P23942 AC025062.2-201ENST00000605477 670 ntBASIC16.12■□□□□ 0.17
PRPH2P23942 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.12■□□□□ 0.17
PRPH2P23942 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
PRPH2P23942 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.12■□□□□ 0.17
PRPH2P23942 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.12■□□□□ 0.17
PRPH2P23942 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
PRPH2P23942 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.12■□□□□ 0.17
PRPH2P23942 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.12■□□□□ 0.17
PRPH2P23942 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
PRPH2P23942 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
PRPH2P23942 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRPH2P23942 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRPH2P23942 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRPH2P23942 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRPH2P23942 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
PRPH2P23942 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRPH2P23942 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRPH2P23942 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRPH2P23942 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
PRPH2P23942 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.11■□□□□ 0.17
PRPH2P23942 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRPH2P23942 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRPH2P23942 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.11■□□□□ 0.17
PRPH2P23942 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.11■□□□□ 0.17
PRPH2P23942 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRPH2P23942 LAGE3P1-201ENST00000425356 484 ntBASIC16.11■□□□□ 0.17
PRPH2P23942 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.11■□□□□ 0.17
PRPH2P23942 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.11■□□□□ 0.17
PRPH2P23942 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRPH2P23942 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.11■□□□□ 0.17
PRPH2P23942 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
PRPH2P23942 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.11■□□□□ 0.17
PRPH2P23942 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PRPH2P23942 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRPH2P23942 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.11■□□□□ 0.17
PRPH2P23942 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.11■□□□□ 0.17
PRPH2P23942 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PRPH2P23942 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms