Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.54□□□□□ -0.08
TNFSF4P23510 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TNFSF4P23510 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TNFSF4P23510 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.54□□□□□ -0.08
TNFSF4P23510 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TNFSF4P23510 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TNFSF4P23510 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFSF4P23510 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFSF4P23510 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.54□□□□□ -0.08
TNFSF4P23510 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC14.54□□□□□ -0.08
TNFSF4P23510 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TNFSF4P23510 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFSF4P23510 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.54□□□□□ -0.08
TNFSF4P23510 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.54□□□□□ -0.08
TNFSF4P23510 AC007326.2-201ENST00000624224 7579 ntBASIC14.54□□□□□ -0.08
TNFSF4P23510 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFSF4P23510 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFSF4P23510 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TNFSF4P23510 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.54□□□□□ -0.08
TNFSF4P23510 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.54□□□□□ -0.08
TNFSF4P23510 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.54□□□□□ -0.08
TNFSF4P23510 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TNFSF4P23510 AL022342.1-201ENST00000400363 863 ntBASIC14.54□□□□□ -0.08
TNFSF4P23510 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.54□□□□□ -0.08
TNFSF4P23510 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.54□□□□□ -0.08
TNFSF4P23510 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.54□□□□□ -0.08
TNFSF4P23510 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC14.54□□□□□ -0.08
TNFSF4P23510 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TNFSF4P23510 IGHV3-22-201ENST00000520721 359 ntBASIC14.54□□□□□ -0.08
TNFSF4P23510 UNC93B6-202ENST00000528242 690 ntBASIC14.54□□□□□ -0.08
TNFSF4P23510 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.54□□□□□ -0.08
TNFSF4P23510 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TNFSF4P23510 TERC-201ENST00000602385 541 ntBASIC14.54□□□□□ -0.08
TNFSF4P23510 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TNFSF4P23510 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TNFSF4P23510 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC14.54□□□□□ -0.08
TNFSF4P23510 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFSF4P23510 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TNFSF4P23510 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14.54□□□□□ -0.08
TNFSF4P23510 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TNFSF4P23510 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TNFSF4P23510 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TNFSF4P23510 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFSF4P23510 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.54□□□□□ -0.08
TNFSF4P23510 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TNFSF4P23510 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFSF4P23510 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TNFSF4P23510 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
TNFSF4P23510 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TNFSF4P23510 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TNFSF4P23510 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFSF4P23510 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFSF4P23510 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFSF4P23510 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.53□□□□□ -0.08
TNFSF4P23510 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFSF4P23510 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
TNFSF4P23510 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TNFSF4P23510 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TNFSF4P23510 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TNFSF4P23510 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TNFSF4P23510 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFSF4P23510 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TNFSF4P23510 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
TNFSF4P23510 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFSF4P23510 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TNFSF4P23510 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFSF4P23510 AC104109.2-201ENST00000602919 1418 ntBASIC14.53□□□□□ -0.08
TNFSF4P23510 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFSF4P23510 AL021920.2-201ENST00000624828 1351 ntBASIC14.53□□□□□ -0.08
TNFSF4P23510 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.53□□□□□ -0.08
TNFSF4P23510 CRYGEP-201ENST00000412192 528 ntBASIC14.53□□□□□ -0.08
TNFSF4P23510 AC108073.2-201ENST00000464002 357 ntBASIC14.53□□□□□ -0.08
TNFSF4P23510 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.53□□□□□ -0.08
TNFSF4P23510 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.53□□□□□ -0.08
TNFSF4P23510 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.53□□□□□ -0.08
TNFSF4P23510 AC145285.3-201ENST00000564603 959 ntBASIC14.53□□□□□ -0.08
TNFSF4P23510 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.53□□□□□ -0.08
TNFSF4P23510 AC010654.1-201ENST00000615722 808 ntBASIC14.53□□□□□ -0.08
TNFSF4P23510 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC14.53□□□□□ -0.08
TNFSF4P23510 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TNFSF4P23510 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TNFSF4P23510 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFSF4P23510 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
TNFSF4P23510 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TNFSF4P23510 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.53□□□□□ -0.08
TNFSF4P23510 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.53□□□□□ -0.08
TNFSF4P23510 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFSF4P23510 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TNFSF4P23510 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
TNFSF4P23510 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFSF4P23510 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFSF4P23510 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TNFSF4P23510 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.52□□□□□ -0.08
TNFSF4P23510 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TNFSF4P23510 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFSF4P23510 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TNFSF4P23510 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TNFSF4P23510 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TNFSF4P23510 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFSF4P23510 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms