Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.5■□□□□ 0.55
RFX1P22670 AL596442.2-201ENST00000610240 980 ntBASIC18.5■□□□□ 0.55
RFX1P22670 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX1P22670 AC008735.5-201ENST00000623544 497 ntBASIC18.5■□□□□ 0.55
RFX1P22670 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX1P22670 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX1P22670 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RFX1P22670 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.5■□□□□ 0.55
RFX1P22670 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RFX1P22670 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RFX1P22670 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX1P22670 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
RFX1P22670 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RFX1P22670 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFX1P22670 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RFX1P22670 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX1P22670 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.49■□□□□ 0.55
RFX1P22670 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX1P22670 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.49■□□□□ 0.55
RFX1P22670 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFX1P22670 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX1P22670 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RFX1P22670 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFX1P22670 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RFX1P22670 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.49■□□□□ 0.55
RFX1P22670 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC18.49■□□□□ 0.55
RFX1P22670 DNAJB3-202ENST00000449667 1266 ntBASIC18.49■□□□□ 0.55
RFX1P22670 PRYP5-201ENST00000451909 266 ntBASIC18.49■□□□□ 0.55
RFX1P22670 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX1P22670 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.49■□□□□ 0.55
RFX1P22670 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.49■□□□□ 0.55
RFX1P22670 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.49■□□□□ 0.55
RFX1P22670 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.49■□□□□ 0.55
RFX1P22670 AL139288.1-201ENST00000623748 933 ntBASIC18.49■□□□□ 0.55
RFX1P22670 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.49■□□□□ 0.55
RFX1P22670 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX1P22670 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX1P22670 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFX1P22670 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX1P22670 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
RFX1P22670 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
RFX1P22670 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RFX1P22670 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RFX1P22670 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX1P22670 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX1P22670 AC092068.3-201ENST00000587894 2016 ntBASIC18.49■□□□□ 0.55
RFX1P22670 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX1P22670 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX1P22670 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RFX1P22670 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RFX1P22670 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RFX1P22670 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.49■□□□□ 0.55
RFX1P22670 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX1P22670 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.48■□□□□ 0.55
RFX1P22670 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX1P22670 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.48■□□□□ 0.55
RFX1P22670 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RFX1P22670 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX1P22670 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.48■□□□□ 0.55
RFX1P22670 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.48■□□□□ 0.55
RFX1P22670 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RFX1P22670 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.48■□□□□ 0.55
RFX1P22670 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC18.48■□□□□ 0.55
RFX1P22670 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFX1P22670 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX1P22670 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX1P22670 AC023274.1-201ENST00000418278 595 ntBASIC18.48■□□□□ 0.55
RFX1P22670 AGGF1P2-201ENST00000426656 2106 ntBASIC18.48■□□□□ 0.55
RFX1P22670 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX1P22670 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.48■□□□□ 0.55
RFX1P22670 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
RFX1P22670 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.48■□□□□ 0.55
RFX1P22670 SNHG9-202ENST00000564014 471 ntBASIC18.48■□□□□ 0.55
RFX1P22670 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.48■□□□□ 0.55
RFX1P22670 MTDHP5-201ENST00000598980 586 ntBASIC18.48■□□□□ 0.55
RFX1P22670 AC004817.3-201ENST00000602957 2129 ntBASIC18.48■□□□□ 0.55
RFX1P22670 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.48■□□□□ 0.55
RFX1P22670 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
RFX1P22670 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX1P22670 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX1P22670 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX1P22670 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX1P22670 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX1P22670 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX1P22670 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RFX1P22670 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.48■□□□□ 0.55
RFX1P22670 AC097637.2-201ENST00000624096 1997 ntBASIC18.48■□□□□ 0.55
RFX1P22670 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RFX1P22670 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RFX1P22670 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
RFX1P22670 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX1P22670 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX1P22670 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.47■□□□□ 0.55
RFX1P22670 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX1P22670 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX1P22670 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFX1P22670 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RFX1P22670 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX1P22670 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RFX1P22670 METTL21AP1-201ENST00000438852 635 ntBASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms