Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP2B1P20020 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B1P20020 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
ATP2B1P20020 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B1P20020 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
ATP2B1P20020 RPS2P1-201ENST00000434010 821 ntBASIC19.59■□□□□ 0.73
ATP2B1P20020 AC079781.3-201ENST00000449110 356 ntBASIC19.59■□□□□ 0.73
ATP2B1P20020 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.59■□□□□ 0.73
ATP2B1P20020 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP2B1P20020 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.59■□□□□ 0.73
ATP2B1P20020 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.59■□□□□ 0.73
ATP2B1P20020 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.59■□□□□ 0.73
ATP2B1P20020 AC025062.2-201ENST00000605477 670 ntBASIC19.59■□□□□ 0.73
ATP2B1P20020 AL353135.1-201ENST00000606729 504 ntBASIC19.59■□□□□ 0.73
ATP2B1P20020 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.59■□□□□ 0.73
ATP2B1P20020 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B1P20020 FER1L4-210ENST00000615531 5998 ntBASIC19.59■□□□□ 0.73
ATP2B1P20020 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B1P20020 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B1P20020 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
ATP2B1P20020 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP2B1P20020 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B1P20020 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B1P20020 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B1P20020 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP2B1P20020 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B1P20020 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B1P20020 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.59■□□□□ 0.73
ATP2B1P20020 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B1P20020 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.59■□□□□ 0.73
ATP2B1P20020 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
ATP2B1P20020 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2B1P20020 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2B1P20020 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2B1P20020 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2B1P20020 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.58■□□□□ 0.73
ATP2B1P20020 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2B1P20020 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2B1P20020 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2B1P20020 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2B1P20020 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.58■□□□□ 0.73
ATP2B1P20020 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2B1P20020 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
ATP2B1P20020 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
ATP2B1P20020 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.73
ATP2B1P20020 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B1P20020 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
ATP2B1P20020 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B1P20020 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.58■□□□□ 0.72
ATP2B1P20020 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP2B1P20020 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.58■□□□□ 0.72
ATP2B1P20020 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.58■□□□□ 0.72
ATP2B1P20020 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
ATP2B1P20020 AL121894.2-201ENST00000602977 491 ntBASIC19.58■□□□□ 0.72
ATP2B1P20020 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.58■□□□□ 0.72
ATP2B1P20020 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B1P20020 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B1P20020 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B1P20020 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B1P20020 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
ATP2B1P20020 OVCH1-AS1-204ENST00000641955 5529 ntBASIC19.58■□□□□ 0.72
ATP2B1P20020 AC046158.3-201ENST00000624947 2558 ntBASIC19.58■□□□□ 0.72
ATP2B1P20020 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
ATP2B1P20020 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B1P20020 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B1P20020 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B1P20020 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
ATP2B1P20020 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC19.58■□□□□ 0.72
ATP2B1P20020 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
ATP2B1P20020 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
ATP2B1P20020 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.57■□□□□ 0.72
ATP2B1P20020 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
ATP2B1P20020 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B1P20020 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B1P20020 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B1P20020 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B1P20020 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B1P20020 AL590787.1-201ENST00000568856 1315 ntBASIC19.57■□□□□ 0.72
ATP2B1P20020 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B1P20020 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B1P20020 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC19.57■□□□□ 0.72
ATP2B1P20020 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.57■□□□□ 0.72
ATP2B1P20020 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B1P20020 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
ATP2B1P20020 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.57■□□□□ 0.72
ATP2B1P20020 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.57■□□□□ 0.72
ATP2B1P20020 FAM197Y8-203ENST00000450145 560 ntBASIC19.57■□□□□ 0.72
ATP2B1P20020 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.57■□□□□ 0.72
ATP2B1P20020 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.57■□□□□ 0.72
ATP2B1P20020 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
ATP2B1P20020 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.57■□□□□ 0.72
ATP2B1P20020 AC139887.3-201ENST00000568585 713 ntBASIC19.57■□□□□ 0.72
ATP2B1P20020 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.57■□□□□ 0.72
ATP2B1P20020 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.57■□□□□ 0.72
ATP2B1P20020 AL391005.1-201ENST00000623953 2435 ntBASIC19.57■□□□□ 0.72
ATP2B1P20020 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B1P20020 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B1P20020 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
ATP2B1P20020 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
ATP2B1P20020 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms